Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02758 ATGGAAAAGTCAATGGAGAAATATGAAGGTGAGCTGAATCTGAAGGCCACAGAGCTAAGGTTGGGATTACCAGGAAGAGATGAGCCTGAGAAAAGTTCATGCACTAGTAATAGTGTTAGAAGTAACAAGAGATCTTCACCCAAAACCAGCGAAGAGGAGACTATAAGCAAAACTGATCAAGAACACAAGAGTACTGCCCCACCTGCAAAAGTACAGGTAGTGGGATGGCCACCGGTCCGATCTAGCAGGAAGAATATTGTTGATCGTGAGGGATCAGGAAAGTACGTGAAAGTGAGCATGGCGGGTGCAGCTTATTTGAGGAAGATAGATCTGAAGGTGTACAAGAACTACCCAGAACTGTTGATGGCTTTGGAAAGCATGTTCAAGTGCTCATTTGGTGAATATTCAGAAAGGGAAGGTTACAATGGATCTGAATACGCTCCTACTTATGAAGACAAAGACGGTGACTGGATGCTCGTTGGAGATGTTCCTTGGGATATGTTCATGAGCTCCTGCAAGAGGTTGAGAATAATGAAAGGATCAGAAGCAAAGGGCTTGGGTTGTTTATG 569 0.4411 MEKSMEKYEGELNLKATELRLGLPGRDEPEKSSCTSNSVRSNKRSSPKTSEEETISKTDQEHKSTAPPAKVQVVGWPPVRSSRKNIVDREGSGKYVKVSMAGAAYLRKIDLKVYKNYPELLMALESMFKCSFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGLGCL 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02758 189 MobiDBLite consensus disorder prediction 1 72 - -
Bva13g02758 189 PANTHER AUXIN-INDUCED PROTEIN 1 187 - -
Bva13g02758 189 Pfam AUX/IAA family 41 187 IPR033389 -
Bva13g02758 189 SUPERFAMILY CAD & PB1 domains 89 179 - -
Bva13g02758 189 MobiDBLite consensus disorder prediction 45 64 - -
Bva13g02758 189 Gene3D - 88 189 - -
Bva13g02758 189 ProSiteProfiles PB1 domain profile. 93 180 IPR000270 GO:0005515
Bva13g02758 189 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 1 187 IPR003311 GO:0005634|GO:0006355
Bva13g02758 189 MobiDBLite consensus disorder prediction 30 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02758 Bva-Chr13 20191834 20193110 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02758 96 186 B3 DNA Binding Superfamily AT2G46530 38.462 1.89e-12 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Bva13g02758 AUX_IAA 6.6e-49 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02758 K14484 - gmx:100780752 283.493