Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02757 ATGGAAGCTGCAGTTGTTTGtgtgaagaaggagaagatggGTTTTGAGGAGACAGAGCTGAGGCTGGGATGGCCTGGAAATGGAGCTAAGAAAGGTGGAGATCAAGTGGTAAGGAAGAGAGGTTTCTCTGAAACTGACAGCAGCGATGATGAGGAGTCGAGTACCAATGTGGATTTGAAGCTCAATCTTTCTGCTAAGGATTCTACTGCTAAAGCTGCTGCAGATCCAACTCATGACAACTCCAACAATAACTTTCCCAAGGAGAAGACCCTTCTCCCCGCTGATCCAGCCAAACCTCCTCCCAAGGCGCAAGTGGTGGGTTGGCCACCAGTGCGGTCGTTCCGGAAGAACATATTATCGGTGCAGAAGAACAGTAGCAGCGGAGAGGAGAGCGAGAAAGGAAGCCCTAATGGGAATGGAAGCTTTGTGAAAGTGAGCATGGACGGAGCACCTTACCTCCGCAAAGTGGATTTGAAGCTGTACAAGAGTTACCAAGACCTCTCTGATGCCTTGGGCAACATGTTCAGCTCTTTCACCATagGGAATTGTGAATCCCAAGGAATGAAGGATTTCATGAACGAGAGCAAGCTCATGGATCTCCTTAGCAGCTCCGACTATGTCCCAACCTATGAAGACAAAGATGGTGACTGGATGCTTGTCGGTGATGTCCCTTGGGACATGTTTGTTGAATCATGCAAGCGTCTGCGCATCATGAAGGGAAAGGAGGCTATTGGACTTGCACCAAGAACCATGGAGAAATGCAAGAATAGAAGCTG 776 0.4742 MEAAVVCVKKEKMGFEETELRLGWPGNGAKKGGDQVVRKRGFSETDSSDDEESSTNVDLKLNLSAKDSTAKAAADPTHDNSNNNFPKEKTLLPADPAKPPPKAQVVGWPPVRSFRKNILSVQKNSSSGEESEKGSPNGNGSFVKVSMDGAPYLRKVDLKLYKSYQDLSDALGNMFSSFTIGNCESQGMKDFMNESKLMDLLSSSDYVPTYEDKDGDWMLVGDVPWDMFVESCKRLRIMKGKEAIGLAPRTMEKCKNRS 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02757 258 MobiDBLite consensus disorder prediction 33 47 - -
Bva13g02757 258 Pfam AUX/IAA family 17 249 IPR033389 -
Bva13g02757 258 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 8 251 IPR003311 GO:0005634|GO:0006355
Bva13g02757 258 MobiDBLite consensus disorder prediction 22 109 - -
Bva13g02757 258 PANTHER AUXIN-INDUCED PROTEIN AUX28 8 251 - -
Bva13g02757 258 Gene3D - 135 251 - -
Bva13g02757 258 MobiDBLite consensus disorder prediction 74 88 - -
Bva13g02757 258 SUPERFAMILY CAD & PB1 domains 130 239 - -
Bva13g02757 258 MobiDBLite consensus disorder prediction 121 142 - -
Bva13g02757 258 ProSiteProfiles PB1 domain profile. 140 240 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02757 Bva-Chr13 20182367 20184399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02757 131 243 B3 DNA Binding Superfamily AT3G61830 33.628 1.53e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bva13g02757 AUX_IAA 1.7e-85 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02757 K14484 - gmx:100810013 343.584