Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02743 ATGGCCGTCGACGCCCTCAAACTGCGAAGAGACTCCCTCTCTGGACCTCCGTCCGAGACTCCTCCTCCGCTTCACGGGGCCGTGCGCTTCGACGGATCGGTTCCCAAGGAGACACATTTTAGAGGTGTGCGCAAGCGTCCGTGGGGCCGATTCGCCGCCGAGATCCGTGATCCGTGGAAGAAGACGCGCAAATGGCTTGGCACCTTCGATACTGCTGAGGAGGCCGCCAGAGCCTACGACGAAGCTGCCAGGACTCTCCGCGGACCCAAGGCCAAGACCAACTTTGTCTACGGTGCCGTTCCTGTCGCGCCGGCCATTGCGCTTTCCCCGGCCATGGTTGCTACTGCTGCCACTGTCGGAGGCAGTGGCGAAATGTTCGGGAGGCGCGTAGAGTTTTGGAGGCCGCCAGTGTACTTTGCGGCGGAGATGCCGACTGGAGTTCCGGCGAGGTCGGAGTACAAGGGGTACAAGTTAGAGAATGTGGATATTGTAGTGGTggaggaggagaagaagatgagaaaggagaagaagccGCGCATGTTCGACCTGAACCAGCCGGCGCCATCCTTCTG 572 0.5734 MAVDALKLRRDSLSGPPSETPPPLHGAVRFDGSVPKETHFRGVRKRPWGRFAAEIRDPWKKTRKWLGTFDTAEEAARAYDEAARTLRGPKAKTNFVYGAVPVAPAIALSPAMVATAATVGGSGEMFGRRVEFWRPPVYFAAEMPTGVPARSEYKGYKLENVDIVVVEEEKKMRKEKKPRMFDLNQPAPSF 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02743 190 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
Bva13g02743 190 CDD AP2 38 95 IPR001471 GO:0003700|GO:0006355
Bva13g02743 190 SUPERFAMILY DNA-binding domain 39 96 IPR016177 GO:0003677
Bva13g02743 190 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
Bva13g02743 190 MobiDBLite consensus disorder prediction 1 31 - -
Bva13g02743 190 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 33 121 - -
Bva13g02743 190 Gene3D AP2/ERF domain 38 97 IPR036955 GO:0003700|GO:0006355
Bva13g02743 190 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Bva13g02743 190 PRINTS Ethylene responsive element binding protein signature 62 78 IPR001471 GO:0003700|GO:0006355
Bva13g02743 190 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 33 121 - -
Bva13g02743 190 Pfam AP2 domain 38 88 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02743 Bva-Chr13 20115813 20117069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02743 30 95 AP2-EREBP Transcription Factor Family AT1G50640 84.848 5.98e-32 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva13g02743 AP2 2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02743 K09286 - zju:107425904 219.935