Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02733 ATGGGTGACAAATTTTGTGTGAGCGAAGAAGACAAAGTTCTGGTGGAATCTGTGTTGGGTACCGAAGCCGCTGCATTTTTTATCTCGGCGGCTTCCAATAATGTGCTATCCGATGTAATTGTACCAGCAGGCGAATTGGGTTTCCAGCAGCGCTTGTCCCAGCTTATTGAAGGGTCCAAGTGGAATTATGGCATCTTTTGGCATGTTGTTGGGTTGAAGTCTGGTGGGTCTGCATTGATTTGGGGTGACGGGCATTGTCGGGAACCCAATTCAGGAGGTGGAGGCGAGCTCAATGGAGTTGGAAGGGGGGAGGAGGTGAAAAGGAAGGTACTTCAGAAGCTTCATGCCTGCTTTGGTGGGTTAAAGGAGTCTAATTCTACCAGGTTTGCTAGAGTCTCCGATGTGCATATGTTCTACTTAACTTCAATGTATTATATGTTTGGACTTGATTCACCATATGGCCCTGGAAATTGCTTCAAGTCTAATAAATCAATTTGGGTTTCTGACACTGCTAGCTGTTGGAATCAATATGAATCAAGATCCTATCTGGGTAGATTGGCTGGTTTTCAATCAGTTGTTTTTGTGCCTCTCAAGTCTGGGGTTGTCGAGTTAGGTTCAGTGGAAATGGTACCGGAAGAACAGAGTATGTTGGACATGGTCAGGACAACATTTGGGGAATCTACTTCTGGACAGGCAAAGGTATTCCCCAAGATTTTTGGGCATGAACTGAGCCTTGGTGATACAAAATCTCAGTCAGTAACTATTAGTTTCTCCCCAAAGGTGGAAGATGATTCTGGATTTACTTCAGACACTTATGAAGTCCAAGCAAAGGGGTCAAACCATGTTTATGGCAATTCTTCCAATGGCAACATAGGCGACAATAGCGAAGCAAAATTGTTCCCACAATTGAATCAAATGGTTGTCGGGAATTTTAACGCACAAGGAAGGGTTTCTTGTCTGGACCTGGGTAATGACGACTTATCACCTCTCCCAGATGAGCGGAAGCCgagaaagagagggagaaaGCCAGCCAATGGGAGAGAGGAGCCACTGAATCACGTGGAAGCAGAGAGACAGAGACGCGAGAAGCTTAACCAAAGGTTTTATGCCTTAAGAGCTGTAGTTCcaaatatatctaaaatgGACAAGGCATCTCTGCTCGGCGATGCCATTACCTACATCACCGATCTCCAGATGAAGATCAAGGTATTGGAAGCTGAAAAAGACATGATTGACAATAAGGACAAGCAGTTGCCATTGCCAGATATTGATTTCCAGGCCAGACAGGATGATGCCGTCGTCAGAGTTAGTTGTCCAATGGATACTCATCCTGTTTCTGGAGTCGTCAGAACATTCATGGAACATCAAATTGCAGCACAGGAGTCCAATGTTTCAATTGCAGACAACAAGGTAATTCATACATTCTCGATGAGAAATCAAGGTGGTGAGGCTGCTGCTCTACAATTGAAGGAGAAGCTCGAAGCTGCCCTATTGAAAGATTA 1502 0.4401 MGDKFCVSEEDKVLVESVLGTEAAAFFISAASNNVLSDVIVPAGELGFQQRLSQLIEGSKWNYGIFWHVVGLKSGGSALIWGDGHCREPNSGGGGELNGVGRGEEVKRKVLQKLHACFGGLKESNSTRFARVSDVHMFYLTSMYYMFGLDSPYGPGNCFKSNKSIWVSDTASCWNQYESRSYLGRLAGFQSVVFVPLKSGVVELGSVEMVPEEQSMLDMVRTTFGESTSGQAKVFPKIFGHELSLGDTKSQSVTISFSPKVEDDSGFTSDTYEVQAKGSNHVYGNSSNGNIGDNSEAKLFPQLNQMVVGNFNAQGRVSCLDLGNDDLSPLPDERKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIKVLEAEKDMIDNKDKQLPLPDIDFQARQDDAVVRVSCPMDTHPVSGVVRTFMEHQIAAQESNVSIADNKVIHTFSMRNQGGEAAALQLKEKLEAALLKD 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02733 500 Gene3D - 341 414 IPR036638 GO:0046983
Bva13g02733 500 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 348 397 IPR011598 GO:0046983
Bva13g02733 500 MobiDBLite consensus disorder prediction 327 359 - -
Bva13g02733 500 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 49 224 IPR025610 -
Bva13g02733 500 CDD bHLH_AtAIB_like 345 414 - -
Bva13g02733 500 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 347 413 IPR036638 GO:0046983
Bva13g02733 500 SMART finulus 354 403 IPR011598 GO:0046983
Bva13g02733 500 Coils Coil 394 414 - -
Bva13g02733 500 MobiDBLite consensus disorder prediction 322 359 - -
Bva13g02733 500 PANTHER TRANSCRIPTION FACTOR BHLH3 1 498 - -
Bva13g02733 500 Pfam Helix-loop-helix DNA-binding domain 352 398 IPR011598 GO:0046983
Bva13g02733 500 PANTHER MYC 1 498 IPR045084 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02733 Bva-Chr13 20064745 20067043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02733 1 497 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G16430 49.802 8.74e-167 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva13g02733 bHLH-MYC_N 4.5e-40 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02733 - - gmx:100819968 697.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02733 13 20064745 20067043 Bva13g02733 13 20064745 20067043 ECH