Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02730 ATGGGTGTTCCAGAAAACATTGCTATTGGTTCTCATATTTGGGTTGGAGATCCAGAACTGGTTTGGATTGACGGACAAGTATTGAATATTAATGGAGAGGAGGCTGAGATTCAAACTAGTGATGGGAAGATGGTTGTTGCCcatttgtcaaaattatatCCAAAGGATACAGATGCTCCTGCTGATGGAGTTGATGACATGACAAAACTTGCATATTTGCATGAGCCAGCGGTGCTGAATAATTTGGCAGCGAGATACAAGATCAATGAAATATATACTTATACTGGAAATATTCTTATTGCCATCAATCCATTCCAAAGTCTTCAACACTTGTCTGATGTTGAAACAATGAAACGTTACAAGGGAGCAACACTTGGAGATTTAAGCCCTCATGTTTTTGCTATTGCTGAAACAGCATATAGGGCAATGATTGCTGAGGAGAAAAGCAACTCTATTCTGGTTAGTGGTGAGAGTGGTGCTGGTAAGACAGAATCTACCAAAATGATTATGCATTATCTTGCTTTTCTGGGTGGTCATACAGCTGCCGAAGGGCGAACTGTCGAGCAACAAGTTTTAGAATCGAACCCAGTTCTCGAAGCATTTGGCAATGCAAAAACTGTTCGAAATGATAATTCCAGCCGTTTCGGAAAATTTGTTGAGAttcaatttgacaaaaaaggaagaatatcTGGTGCAGCCATTAGAACTTATCTTCTAGAGAAATCTCGTGTTTGCCAAGTCTCAGATCCTGAGCGTAATTATCACTGCTTTTACCTTCTATGTGCTGCTCCACCGGAGgaAAGGGAGAGATATAAGTTGGGAGATCCTTCATCATTTCACTACCTTAATCAATCCAATTGCTATGAATTAAGTGGAATTAATGCTGCTCAGGAGTACCTTAAAACCAAGAGGGCCATGGATATTGTGGGAATTGGTGAGCAAGAACAGGAAGCAATTTTCAGAGTAGTGGCTGCTATTCTTCATCTTGGAAACATTAAGTTTGCAGGAGAATCTGATTCATCAGTTTTAGCCGATGAAGTATCCAGGTTCCATCTCCAAATGACAGCTGAACTTTTCATGTGTAATCCAACTGCTTTGGAAGATGCACTCTGTAAGCGTATGATGATTACCCCAGAAGAAATCATTAGGAGAAGTCTTGATCCTCTTGGTGCGGCAGTCAGCAGGGATGGTTTAGCTAAGACCGTGTATTCACGTTTGTTTGATTGGTTAGTcagtaaaattaatatctcCATTGGGCAAGACTCTAGCTCAAAATTTCTGATTGGGGTTCTTGACATATATGGTTTCGAAAGCTTTGCAAATAATAGTTTTGAGCAGTTTTGTATCAACTATAcaaatgaaaagctccagCAACACTTCAACCAGCATGTCTTtaagatggagcaagaaggatATACACGGGAAGGAATTGACTGGAGTTACTTACAATTTGTTGATAATCAAGATGTATTGGATCTCATTGAAAAGAAACCAGGGGGAATCATTGCTCTGCTTGACGAAGCATGTATGTTTCCAAAGTCAACTTACGAGACATTTTCAGAAAAGCTTTATCAGACGTTCAAAACTCACAAACGATTCATCAAGCCAAAATTGGCTCGATCAGACTTTACCATTGTTCATTATGCAGGGGAGGTTCAATATCAGTCTGAACTGtttttagataaaaacaaaGACTATGTTGTTACTGAACACCAAGAATTGCTTAGTGCTTCCAAATGTCCTTTCATAGCTGGTCTTTTCCCTCCAGCTTCTGAGGAGACAGCCAAAACTTCTAAGTTTTCTTCCATTGGTTCTCGTTTTAAGCTACAATTACAACAATTGATGGATACGCTCAGCTCCACAGAGCCCCACTATATTAGATGTGTGAAGCCTAATATTTTGTTGCAACCTTCcatatttgataatatgaATGTCATCCAACAACTACGTTCTGGGGGTGTTCTTGAAGCAGTTAGAATTAAATGTGCTGGATTCCCTACTCACTGGACctttcatgaatttttaacTCGATTTGATATTCTTGCTCCTGAGGTTCTTGGAGAGAaCAGTTTTGATGAAAAGGAGTCTTGCAAAAAGATTTTGGAGAAAATTGGCCTTACAGGTTACCAGGTTGGGGAAACACAGATATTTTTAAGAGGTGGTCAGATGGCTGACTTGGATGCTCAAAGAGCTCGTCTGCTCAGCAACTCTGCAATGGTTATCCAGAAGCAGGTCAAAGCTTGTCTTGCACATACAGCGTTTCTGACATTGCGAAAGGCTTCTATTTGTATGCAGTGCTTTTGTAGGGGAGAACTGGCTCGGACATCGTATTTTCGCTTAAAGAGGGATACAGCTGCTGTCAAAATTCAAAGACATATACGAGGAAAACTTGCCAGAATAAAGTACAATCAAACAAAGGCTTCTATCATTGTCTTGCAGACGGGTATTCGGGCAATGGTAGCTCATGAAGAATTGAGGCGAAGAAAGCAAACTCGTGCAGCGGTTACTATTCAGGCTTCAGACAAAACGGTGGAGGACAATGAAAGTCCTTACATCGAAGAATCCTCAATGCCCGTCCAAGATGCTGGAATGACTGAGGCTATAAGCGAGTCCTCAAATCCTGTCATAGCTGCTGAAACCATTGATGCTATCAGGGAATCCTCAAATCATCTCACAGACAGCGAAAAGATTGAGACTCTCACTGCAGATGTAATAAGTTTGAAGGTCATGTATCAGGCTGAAAAACAAAGAGCTGATGAATGCGAAAGGAAATATACAGAAGCCCAGGAATCTAGTGAAGAGTTACGCAAAAAGTTAGCAGAAACTGAAAAACGAGTATATCAGCTTCAGGAATCATTAAACAGGATGATATCTTCCATGTCGAGCCAAGTTGCAGAGCTGAAAATGATCTTAAGTACTTCATCAAGATTGAGTTCCACTTTTCGACCTATTGCTAGAGTCGATGTTGCTTCCAGTAACTCTGATAGTTCATCCTCCGATTCTGATTTCACATTCCCGGCTACTGTTTCAAATCCAGCAACTTATTCTTCCTCCATGCCTAACTCTTTTCAACTAGTAGTTCAGGATGTCTCAGCAGCAGATGTTGATGGATCTGAAGGTTTGAAGGAGGGTCCATTTGATGCTTACTTCTA 3152 0.3915 MGVPENIAIGSHIWVGDPELVWIDGQVLNINGEEAEIQTSDGKMVVAHLSKLYPKDTDAPADGVDDMTKLAYLHEPAVLNNLAARYKINEIYTYTGNILIAINPFQSLQHLSDVETMKRYKGATLGDLSPHVFAIAETAYRAMIAEEKSNSILVSGESGAGKTESTKMIMHYLAFLGGHTAAEGRTVEQQVLESNPVLEAFGNAKTVRNDNSSRFGKFVEIQFDKKGRISGAAIRTYLLEKSRVCQVSDPERNYHCFYLLCAAPPEERERYKLGDPSSFHYLNQSNCYELSGINAAQEYLKTKRAMDIVGIGEQEQEAIFRVVAAILHLGNIKFAGESDSSVLADEVSRFHLQMTAELFMCNPTALEDALCKRMMITPEEIIRRSLDPLGAAVSRDGLAKTVYSRLFDWLVSKINISIGQDSSSKFLIGVLDIYGFESFANNSFEQFCINYTNEKLQQHFNQHVFKMEQEGYTREGIDWSYLQFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTYETFSEKLYQTFKTHKRFIKPKLARSDFTIVHYAGEVQYQSELFLDKNKDYVVTEHQELLSASKCPFIAGLFPPASEETAKTSKFSSIGSRFKLQLQQLMDTLSSTEPHYIRCVKPNILLQPSIFDNMNVIQQLRSGGVLEAVRIKCAGFPTHWTFHEFLTRFDILAPEVLGENSFDEKESCKKILEKIGLTGYQVGETQIFLRGGQMADLDAQRARLLSNSAMVIQKQVKACLAHTAFLTLRKASICMQCFCRGELARTSYFRLKRDTAAVKIQRHIRGKLARIKYNQTKASIIVLQTGIRAMVAHEELRRRKQTRAAVTIQASDKTVEDNESPYIEESSMPVQDAGMTEAISESSNPVIAAETIDAIRESSNHLTDSEKIETLTADVISLKVMYQAEKQRADECERKYTEAQESSEELRKKLAETEKRVYQLQESLNRMISSMSSQVAELKMILSTSSRLSSTFRPIARVDVASSNSDSSSSDSDFTFPATVSNPATYSSSMPNSFQLVVQDVSAADVDGSEGLKEGPFDAYF 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02730 1050 Pfam Myosin head (motor domain) 64 719 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva13g02730 1050 Gene3D Kinesin motor domain 65 660 IPR036961 -
Bva13g02730 1050 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 782 IPR027417 -
Bva13g02730 1050 PANTHER MYOSIN 893 988 - -
Bva13g02730 1050 PANTHER MYOSIN 6 861 - -
Bva13g02730 1050 ProSiteProfiles IQ motif profile. 757 786 IPR000048 GO:0005515
Bva13g02730 1050 ProSiteProfiles Myosin motor domain profile. 62 731 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva13g02730 1050 PANTHER MYOSIN MOTOR DOMAIN PROTEIN AND DIL DOMAIN PROTEIN 893 988 - -
Bva13g02730 1050 SMART MYSc_2a 56 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva13g02730 1050 Gene3D Myosin VI head, motor domain, U50 subdomain 312 599 - -
Bva13g02730 1050 Gene3D - 437 621 - -
Bva13g02730 1050 SMART iq_5 756 778 IPR000048 GO:0005515
Bva13g02730 1050 SMART iq_5 781 803 IPR000048 GO:0005515
Bva13g02730 1050 SMART iq_5 804 826 IPR000048 GO:0005515
Bva13g02730 1050 PANTHER MYOSIN MOTOR DOMAIN PROTEIN AND DIL DOMAIN PROTEIN 6 861 - -
Bva13g02730 1050 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva13g02730 1050 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva13g02730 1050 PRINTS Myosin heavy chain signature 480 508 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva13g02730 1050 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva13g02730 1050 PRINTS Myosin heavy chain signature 427 455 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva13g02730 1050 Pfam Myosin N-terminal SH3-like domain 10 48 IPR004009 GO:0003774|GO:0005524|GO:0016459
Bva13g02730 1050 Gene3D - 252 310 - -
Bva13g02730 1050 ProSiteProfiles IQ motif profile. 782 809 IPR000048 GO:0005515
Bva13g02730 1050 Gene3D - 784 836 - -
Bva13g02730 1050 Gene3D - 734 783 - -
Bva13g02730 1050 CDD MYSc_Myo11 76 719 IPR036018 -
Bva13g02730 1050 Gene3D - 664 732 - -
Bva13g02730 1050 Coils Coil 911 952 - -
Bva13g02730 1050 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Bva13g02730 1050 Pfam IQ calmodulin-binding motif 785 802 IPR000048 GO:0005515
Bva13g02730 1050 Pfam IQ calmodulin-binding motif 758 777 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02730 Bva-Chr13 20037625 20051443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02730 1 942 Myosins gene family AT1G08730 66.456 0.0 1301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02730 K10357 - gmx:100803485 1581.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02730 13 20037625 20051443 Bva13g02730 13 20037625 20051443 ECH