Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02729 ATGGAAGGAAACTATCAGAGCAGCAACAAGCAGCTCAGAGAGGACAGTTTCAGCTTTGAAGAGCATACATTCGGATCATCAACTTCATGGCCAGCCAGAAGTTATGCTTGTAGCTTTTGCAAGAGAGAATTCAGGTCTGCTCAAGCTTTGGGTGGCCATATGAATGTTCACAGGAGAGATAGAGCAAGAATGAGATCAGGGTTACCTTATTGGGTTTCTGCTGAATATCCTAAACttaaccctaaccctaaccctaacccaagtttcctaatttcatcatcttcctcaGCAGCATCTTCTAATTTATCCGATGATTATCTGCCACAACATGCTGCACATCACTCTCCACTTTATAGTCCTTCTCTGACTTTATCTTCTTCACCCTCCTCAGCTTCTACCAGCACCGAAGATAAGAGATTATCAATAATCACATCTTCACAGATTCTTCCTCAAAGtggggaaagaaaaatggataaaaGCAAGAGGAGTGGTTTGGGGTTTGAGGAATCCAAGGGTTTTGGTGATCAGGATCAGCACAAGGGGTTCAAGAACAATGAGAATATCATCAGTTTGGAGTTGGGAGTTGGGTTGCTTAAACACCCAAATGAGAAGTTGGATTTGGAGCTGCGACTCTA 635 0.3827 MEGNYQSSNKQLREDSFSFEEHTFGSSTSWPARSYACSFCKREFRSAQALGGHMNVHRRDRARMRSGLPYWVSAEYPKLNPNPNPNPSFLISSSSSAASSNLSDDYLPQHAAHHSPLYSPSLTLSSSPSSASTSTEDKRLSIITSSQILPQSGERKMDKSKRSGLGFEESKGFGDQDQHKGFKNNENIISLELGVGLLKHPNEKLDLELRL 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02729 211 PANTHER OS07G0101800 PROTEIN 3 211 - -
Bva13g02729 211 MobiDBLite consensus disorder prediction 154 181 - -
Bva13g02729 211 SUPERFAMILY beta-beta-alpha zinc fingers 32 62 IPR036236 -
Bva13g02729 211 SMART c2h2final6 35 57 IPR013087 -
Bva13g02729 211 MobiDBLite consensus disorder prediction 118 181 - -
Bva13g02729 211 Pfam C2H2-type zinc finger 35 59 - -
Bva13g02729 211 ProSiteProfiles Zinc finger C2H2 type domain profile. 35 62 IPR013087 -
Bva13g02729 211 PANTHER TRANSCRIPTIONAL REGULATOR SUPERMAN 3 211 - -
Bva13g02729 211 MobiDBLite consensus disorder prediction 118 153 - -
Bva13g02729 211 ProSitePatterns Zinc finger C2H2 type domain signature. 37 57 IPR013087 -
Bva13g02729 211 Gene3D Classic Zinc Finger 6 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02729 Bva-Chr13 20033790 20035002 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02729 20 211 C2H2 Transcription Factor Family AT3G23130 40.000 1.58e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva13g02729 zf-C2H2_6 4.7e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02729 - - gmx:102662947 173.711