Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02728 ATGGAATTCAGTTTCCCAGAAGACTCCAAGAGCTCCAGCGAAGAAACAGATCGATCATCAGACCAAAATTATGATCACACGGTCGCTAGCAGATCCTATGAGTGTATGTTTTGCAAGAGAGGCTTCACTTCGGCACAGGCTTTGGGTGGACACATGAACATACACAGAAAAGATAGAGCCAGCAAGGCCAAACCCAAATTTCCTCCTTCAAGTTCAACCAAAGTTGATTCCAACTCTGCAGATCTTGGGTTTTGTTCAGCAATCCGAAGCCCGGATCCGTGGAACTATTACTCCTCTTCTTCTGAGGTAAACGCCAATTACCATcaaatcttttttcctttcatgaGACACTATAGTGAGGTCTTTTGTGCACAAAACCAACAAGATCGTAACTTATTTGGACAAGATTGGAGGAGCAGTTTGAGCTTGTATAGTGATCCGTTATGTGTTggtgaaaataaaagcaaggTAGCAGACAGTGGTGAAGAGGATGGGTTGGATTTGGAGCTTCGACTTGGTTATGCATG 527 0.4099 MEFSFPEDSKSSSEETDRSSDQNYDHTVASRSYECMFCKRGFTSAQALGGHMNIHRKDRASKAKPKFPPSSSTKVDSNSADLGFCSAIRSPDPWNYYSSSSEVNANYHQIFFPFMRHYSEVFCAQNQQDRNLFGQDWRSSLSLYSDPLCVGENKSKVADSGEEDGLDLELRLGYA 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02728 175 PANTHER TRANSCRIPTIONAL REGULATOR TAC1-LIKE 1 174 - -
Bva13g02728 175 MobiDBLite consensus disorder prediction 1 25 - -
Bva13g02728 175 ProSiteProfiles Zinc finger C2H2 type domain profile. 33 60 IPR013087 -
Bva13g02728 175 Pfam C2H2-type zinc finger 33 57 - -
Bva13g02728 175 PANTHER OS07G0101800 PROTEIN 1 174 - -
Bva13g02728 175 ProSitePatterns Zinc finger C2H2 type domain signature. 35 55 IPR013087 -
Bva13g02728 175 Coils Coil 174 175 - -
Bva13g02728 175 MobiDBLite consensus disorder prediction 7 24 - -
Bva13g02728 175 Gene3D Classic Zinc Finger 8 83 - -
Bva13g02728 175 SUPERFAMILY beta-beta-alpha zinc fingers 30 60 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02728 Bva-Chr13 20027387 20028191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02728 27 174 C2H2 Transcription Factor Family AT4G17810 34.228 2.57e-15 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva13g02728 zf-C2H2_6 5.4e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02728 - - ccaj:109812060 181.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02804 04 24151650 24152189 Bva13g02728 13 20027387 20028191 BWGD
Bva13g02728 13 20027387 20028191 Bva13g02728 13 20027387 20028191 ECH