Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02724 atggCTTCTTCAACTGCAAATAGCAGCTCTGGCACTGGTTCTCCTTGTGGGGCATGCAAGTTCCTCAGGCGAAAGTGCGCTGTTGATTGTATCTTTGCTCCTTATTTTTGCTCTGAACAAGGCCCTGCTAGGTTTGCAGCCATTCATAAGGTGTTTGGTGCTAGTAATGTTTCCAAACTGCTCCTGCATATACCAGCTCATGATCGTTGTGATGCTGTTGTTACAATCGCCTACGAAGCCCAAGCAAGGATTAGAGACCCGGTTTATGGCTGTGTCTCTCACATTTTTGCCTTGCAACAACAGGTGGCGTGTTTGCAGGCACAACTGATGCAAGTGAAGGCTCAGCTGGCGCAGAACCAAATTGAATCAAGAAACACAGAGAATCAATGGGCAGGGAATGTTGGTGGACAAGCAGGGAATCCATTTTGCGCCAACTACATGAACCCTATATCTCCTCAGAGCTCGCTTGAATCAATTGATCACAGCATCAATGAGGGAATGAGTATGCCAGATATGCAGAGCTGCAGGGAGGATTTCTCATTCCAACCTTATTCTAAGAAAAGATCATATAACGATAATGACTTGGGTGAGCTTCAAGAATTGGCTCTCAGGATGATGAGGAACTA 626 0.4553 MASSTANSSSGTGSPCGACKFLRRKCAVDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHIPAHDRCDAVVTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQLMQVKAQLAQNQIESRNTENQWAGNVGGQAGNPFCANYMNPISPQSSLESIDHSINEGMSMPDMQSCREDFSFQPYSKKRSYNDNDLGELQELALRMMRN 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02724 208 PANTHER LOB DOMAIN-CONTAINING PROTEIN 16 6 207 - -
Bva13g02724 208 Pfam Lateral organ boundaries (LOB) domain 15 113 IPR004883 -
Bva13g02724 208 ProSiteProfiles LOB domain profile. 14 116 IPR004883 -
Bva13g02724 208 PANTHER LOB DOMAIN CONTAINING PROTEIN 6 207 - -
Bva13g02724 208 Coils Coil 95 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02724 Bva-Chr13 20011026 20012049 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02724 1 208 AS2 family AT2G42430 54.618 7.59e-80 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bva13g02724 LOB 6.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02724 K13944 - gmx:100801508 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02800 04 24131239 24132262 Bva13g02724 13 20011026 20012049 BWGD
Bva13g02724 13 20011026 20012049 Bva13g02724 13 20011026 20012049 ECH