Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02719 ATGGGTAGGGATCGTCTGCTATTGCCAACAGTTGGACCGCCATTAAAACGGCGAGCAGGGTTGCGGAGGAAACAGGCTGGAAGAGGGATCTTGACATGGGAGGATGCTTACTATGACAATCCTGATGATTATGattcttcatcttcagaaAATAAGTGCTGCCCAAAGACCACGGAACAGAGTCATGGTGGACATTTTTCACAGGACCCTCTGGGGTTAGCTGTAGCAAATATGTCATATCATGTATATTCTTTAGGGGAAGGTATTGTTGGACAGGTAGCTGTTACAGGAAAGCATCGCTGGATCTGTGCAGATAAGCAAGTCACAGGTTCTGGCTCGTCATTTGAGTTCACTGATGGGTGGCAATCTCAGTTTTCTGCTGGAATTAGGACCATTGTTGTTGTAGCTGTAGTCCCGCTAGGAGTTGTTCAACTTGGCTCTTTAAATAATGTCGTTGAAGATATGGGGGTTGTAACTCATATCAGAAATCTCTTTTTGGAAACTCAAGATTTCTCGATAGGTCATTTTCCTAGTCAAATACAAAATAGTGCAAAGAATTCTCCATCTCCGCCAGATGCATCAACGAAAAATTTGCTGTCAGAGATTGTACCTGATTGCTTACATGATATAgagagaacaagaaagagtGAAACGCTGGATAGTTTTCCCTTTAAATGTTCTGGGAAAAACTTTTCACCTACTGCTGTTTATCAGAACATGGCTGTTGATGCGGCCAAGCATGGGGGGCCTGAATTATACAGTGATGAAAGTTCCATTTTGCTTCAGTCAATAACAAATACAATGAATTTGGagcataaaaaaatcatagagaTGAGACCTGTAAATGAGATGAAGTGTGGAGGTGACAGCAGCGGCTGTGAAGATATGAGGGTGGAAACCGGAAAAAAAGTTACATCGTTGGCACACACTTCAGTTATGGATAACAGTAGCTTCAATGATTTCATACTTCCATCTGAAAATGTTGGAGTTGATTCTGCCTCCTTCCCTTCCGGCTTTCTTGATGCCATTGTGTGTGAAAGTGACAAGTTACGTTATTCGGATATTAACCAAAAAGGAGTATTGAATTTGCCCAAACCTTTAGATGCAACCTCACACAAAGATACAGGAAAGTCAGGGTGTCAGACCGAAACTTGTTACAGGGATACCTCGTACACATTGTTGAACTTCCCTGCTGGCTGTGAGCTACATGAAGCACTTGGACCagattttcttaaaaggagTAGATATTTTGATTGGGAGGCACAGGTGAATCAAGATACTAAACCTGTGGTGATGCCAGATGAGATCAGCTGTAGTCAGTTGACTTCTGAATCTCATCTAGAGCATCTATTGGAAGCAATAGTGGCAAATGTTTGCCATAGTAATAATGATGTTAATAGTGAGCTATCATTTTGTACATCAGTGAGGTCCGCAATGGCACCTGAAAGAAAACCTGAAGCTTCTATTCATACTGTGCACTCTATAAATTCAGAAGGTTTTTCAATGGATCATCCCTCTCTTGTCAGGGAAGATAAACAACGTTGTTTGAGTTCATCAGGGATTTGCAGTGTGATGTCCCCCAAAGGTTTTTCATCCACATGTCCTAGCTCATGCAGTGAACAGTTTGAAAGGTCTTCAGAACCAGCtaagaacaacaaaaagagGGCTAGACCTGGAGAAAGTTGTAGGCCCAGACCAAGGGACAGACAACTGATCCAAGATCGTATTAAGGAGTTGAGAGAGCTGGTTCCAAATGGGGCAAAGTGCAGCATTGATTCATTGCTGGAGCGCACAATAAAGCACATGCTCTTTCTGCAGAGCGTAACAAAGCATGCTGACAAGCTAAATAAATTCACTGATTCAAAGACAAAGTTGCATCACATGGAAGTAGATGTTCATGGATCCTCTAGCTATGAACAAGGTTCAAGTTGGGCAATGGAGGTAGGAGGCCATCTGAAAGTTCGTTCAATTTTGGTGGAGAATCTTAGCAAGAATGGACAGATGCTCGTTGAGATGTTATGTGAGGAGTGCAgtcattttcttgaaataGCAGAAGCCATAAGAAGCTTAGGCCTGACAATTTTGAAGGGTGCAACAGAAGCTCAAGGAGAGAACACTTGGATATGCTTTGTGGTTGAGGGCCAAAACAACAGAACTGTACACCGATTGGATATCTTGTGGCCGCTTGTTCAAATACTGCAATCCAAGAGTACAATGTATTCGCAATG 2228 0.408 MGRDRLLLPTVGPPLKRRAGLRRKQAGRGILTWEDAYYDNPDDYDSSSSENKCCPKTTEQSHGGHFSQDPLGLAVANMSYHVYSLGEGIVGQVAVTGKHRWICADKQVTGSGSSFEFTDGWQSQFSAGIRTIVVVAVVPLGVVQLGSLNNVVEDMGVVTHIRNLFLETQDFSIGHFPSQIQNSAKNSPSPPDASTKNLLSEIVPDCLHDIERTRKSETLDSFPFKCSGKNFSPTAVYQNMAVDAAKHGGPELYSDESSILLQSITNTMNLEHKKIIEMRPVNEMKCGGDSSGCEDMRVETGKKVTSLAHTSVMDNSSFNDFILPSENVGVDSASFPSGFLDAIVCESDKLRYSDINQKGVLNLPKPLDATSHKDTGKSGCQTETCYRDTSYTLLNFPAGCELHEALGPDFLKRSRYFDWEAQVNQDTKPVVMPDEISCSQLTSESHLEHLLEAIVANVCHSNNDVNSELSFCTSVRSAMAPERKPEASIHTVHSINSEGFSMDHPSLVREDKQRCLSSSGICSVMSPKGFSSTCPSSCSEQFERSSEPAKNNKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERTIKHMLFLQSVTKHADKLNKFTDSKTKLHHMEVDVHGSSSYEQGSSWAMEVGGHLKVRSILVENLSKNGQMLVEMLCEECSHFLEIAEAIRSLGLTILKGATEAQGENTWICFVVEGQNNRTVHRLDILWPLVQILQSKSTMYSQ 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02719 742 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 23 165 IPR025610 -
Bva13g02719 742 MobiDBLite consensus disorder prediction 546 568 - -
Bva13g02719 742 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 556 605 IPR011598 GO:0046983
Bva13g02719 742 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 24 742 - -
Bva13g02719 742 MobiDBLite consensus disorder prediction 541 568 - -
Bva13g02719 742 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 24 742 IPR043561 GO:0003700|GO:0006355
Bva13g02719 742 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 569 612 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02719 Bva-Chr13 19979937 19986061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02719 25 737 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 40.957 3.14e-148 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02719 - - ccaj:109796613 960.674
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02795 04 24100509 24106200 Bva13g02719 13 19979937 19986061 BWGD
Bva13g02719 13 19979937 19986061 Bva13g02719 13 19979937 19986061 ECH