Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02717 ATGAGCTCCTCAGACTCTCCTTCTATACCTTTCAGATCTAAGAAGCCCCATCATCACCACTCCGCATCTAAATCTCAATCACCAGATCCCATTCAATTGAGCTCCAAAACCCCAGAGAAGCCCTCGCAGTTCTCAAGCCGTTCGCGCAACCGTGGCGTTGCACTCTCTATCAAAGAAATCAGGAAGGTTGCTCAAAACCTTCAGGAACGGAATCGCGAGCAGCATCATGATCCGACGGCGCAGATCAAATCCGCCAGAAGGCAGATTACAATGTTGTCGCCTTGTAAATCCAAGGTTCCGGTTAATGAACCCACCAAGCTGCCGGAAAaGTATGAAATGTTGGCTGAGTTCTTCAATAGTTTGGATAGTTCAATTCGCTTATTGCGTTTAAAAGGGTCGACCCCAACTTTCACGAATATTTGCCCGAAGATTCAATCTTTAACTGATAGGAGGTTTACTCATGCGCACTTGGCCCAGTTGAAATTTATCTTGCACGAGGCAATTGTTATAAAGAAGGTACTCGCGTTAGATGAACGGACAAGTTGTATGAAGCCAGACCTCCATATTACTTTAAATCCTGATGCGATAGAATCCGATGCAAAGTTGCTCTCTGAATCTGGAAGTATGTCACTGAGGAAGTTTGTTCGTACATGGCTCAGAGATTTTCTTAAATCCCATCCTGAGGGTGATGAAATTCCAGGAGAGATGTTGCCTGAACCATTCAATCGCCCAAAGAAAGACCATTCAGACTTGTTGAAGATTTCCCCATCATCATTCCCTACAGAGGTGTCATCTGGCGCATGTGAAGCTCATCCTTCAGCAATATTGTCAGCTGGCATGCAGGATAATGAAAATCCACATAAACAAGAACCTTCTTTTGTTAATCATATGAATCAGGATTTGGGGTCAAGTGTAAACAGTGGAGAAAACTTGTCAATACCTGTCAAGATGTCTATTGAAGCACTTAACCGGCCACCAGCAATAGCCACTCATGTGTCTCAATGCTTCAAAAAGCACTTCTCTCAGAAATTTATGAGAAATGGAGCTGATAATGCACAGCAAAAATTGGCATCAGATTCATTCCAACCTCCATCTTTTCCAGTTTCAGAGTCAACCTCCATCTATGAGGAATCTAGATCTCTTCCTAATACATCCTCATCTAAGTTGGCCTCAGAAGCTGCCAGTAATGAAAGGTGTCCAAAAATTTGTGCTTCTCCAGGTCGTTTCACATCATCAGATGTTCCAGCTGCCACTCCAAGAAAAACCACTGGGCATTCAGAGAATGAAGATGGTTCTGTGAAAGACATTGATTCCATGTCAACTCCAGCTAAACTTGCTTCTACTCCATCTAGGCTTATGACTGTCACTCCCTCACTACCACCACCTAAGAGATCTTACATGAGCCCTGATGACAACTCTTTCAGCTCACCAAACAAATTGGTTAGGCGTCCACCTCGCTCAAGATCATTGAAATTTGACACTCCAGTGAAGAATGAGGAGACTCAGAGCGGATTTACTGATGCTGGTAGTATATCAATTGATGAAGATATTTTTGACATTCTCCCAGAGAATCTTCTCCAATCGattagagaaaaggaaagaatagcaatggaagaaagaaatccAGCCATATCACGAGCCAAGAGGCGACAGAAAATGATTGCCAGTCTCCCTAAGCTCTTTAACATGATTCATCTCTTGTTTCATTCGATAAATCGTTCTGTTATCACAAAAGAGGAGCTTGTAAGCAAGATAATATCAAGCCATTGTGATATTGTTGACAGAAGGGAAGTGGAGGAACAGCTGAATTTGTTGCTAGAACTAGTTCCAGAATGGAtttcagaaaagaaagcaacCAGCGGGGATTTGCTTTTCAGCATAAACAAAATGTTGAACGTTGAGACTCTGCGCTCGCGGCTTGAAGAAGCAAAGTG 1934 0.4183 MSSSDSPSIPFRSKKPHHHHSASKSQSPDPIQLSSKTPEKPSQFSSRSRNRGVALSIKEIRKVAQNLQERNREQHHDPTAQIKSARRQITMLSPCKSKVPVNEPTKLPEKYEMLAEFFNSLDSSIRLLRLKGSTPTFTNICPKIQSLTDRRFTHAHLAQLKFILHEAIVIKKVLALDERTSCMKPDLHITLNPDAIESDAKLLSESGSMSLRKFVRTWLRDFLKSHPEGDEIPGEMLPEPFNRPKKDHSDLLKISPSSFPTEVSSGACEAHPSAILSAGMQDNENPHKQEPSFVNHMNQDLGSSVNSGENLSIPVKMSIEALNRPPAIATHVSQCFKKHFSQKFMRNGADNAQQKLASDSFQPPSFPVSESTSIYEESRSLPNTSSSKLASEAASNERCPKICASPGRFTSSDVPAATPRKTTGHSENEDGSVKDIDSMSTPAKLASTPSRLMTVTPSLPPPKRSYMSPDDNSFSSPNKLVRRPPRSRSLKFDTPVKNEETQSGFTDAGSISIDEDIFDILPENLLQSIREKERIAMEERNPAISRAKRRQKMIASLPKLFNMIHLLFHSINRSVITKEELVSKIISSHCDIVDRREVEEQLNLLLELVPEWISEKKATSGDLLFSINKMLNVETLRSRLEEAK 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02717 644 Coils Coil 57 77 - -
Bva13g02717 644 MobiDBLite consensus disorder prediction 351 506 - -
Bva13g02717 644 SMART CDT1_2 107 239 IPR014939 -
Bva13g02717 644 Gene3D - 514 644 IPR038090 -
Bva13g02717 644 MobiDBLite consensus disorder prediction 351 393 - -
Bva13g02717 644 CDD Cdt1_m 100 251 IPR014939 -
Bva13g02717 644 Pfam DNA replication factor Cdt1 C-terminal domain 524 617 IPR032054 -
Bva13g02717 644 PANTHER DNA REPLICATION FACTOR CDT1 14 644 IPR045173 GO:0003677|GO:0030174|GO:0071163
Bva13g02717 644 MobiDBLite consensus disorder prediction 25 52 - -
Bva13g02717 644 MobiDBLite consensus disorder prediction 1 55 - -
Bva13g02717 644 SUPERFAMILY "Winged helix" DNA-binding domain 100 241 IPR036390 -
Bva13g02717 644 Pfam DNA replication factor CDT1 like 107 205 IPR014939 -
Bva13g02717 644 CDD Cdt1_c 520 641 IPR032054 -
Bva13g02717 644 MobiDBLite consensus disorder prediction 468 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02717 Bva-Chr13 19969057 19972395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02717 6 642 Core DNA Replication Machinery Family AT2G31270 40.000 5.60e-106 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02717 K10727 - qsu:112033519 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02717 13 19969057 19972395 Bva13g02717 13 19969057 19972395 ECH