Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02714 ATGGCAATGAACCAGAACCCATCACACAAGCTTGGATATCAAGCTCTGCAACCCTTAAAAAATCACCCAGAACCTGCTTCGGACTCTGCTTTACCCATCTTTGCCATTGTTGTGGTAAGCATCATGGCTTCGGTTTTCCTACTCATCAGCTACTTTACTTTTGTCACCAAATGCTGCTCAAACTGGCATCAAGTTAACCCATTGCGATGGCTTTCTATCCTGCGTTCGCGACATGATGATGATCCCTTGATAGCACTCTCTCCCAGCGTCTGGAATCGTGGCCTTGATGAATCTGTCATCAGGGAAATCCCGAGCTTTCAATTCACAAAAGGGGTAGGTGAAAATGAGAGTGCAGATCAGAGTGTGTATGGCTGCGTGGTCTGTTTGACTGAGTTTCAACAACACGATATGCTAAAAGTTCTTCCCAATTGCAGCCATGCTTTTCATTTGGACTGCATTGACATTTGGCTGCATACCAATGCCAACTGCCCTCTTTGCAGATCGAGTATTTCAGGCACCACGCGTTCTCCAATGGACCATATCATAGCACCAAGCTCTTCTCCACAAGATTCTCAATTGCTCTCTAACATGGGCAGCGATGAAGATTTTGTAGTCATTGAATTGGGAGGAGGAGAGCATGGGGGAATATTGCCTCAGAGGCAACAAGAGAGGAATGATTCAAGGGGGAGTTTAGCACAGAGTACGAGTTACTCTACCACAAGGAAGATGGAACAAAAGCTTGGAAACTCGGAACCAAGGAAGTGCCATCATGTTTCGATCATGGGAGATGAGTGTATTGATGTTAGAAAGAAAGATGACCAATTCTCTATTCAACCCATTCGAAGATCGTTTTCAATGGATTCTGCAACTGATAGACAAGCCTATTTAGATGTTCAAGCAATCTTACAACGAAATAGGCATCAAAATGAAGCTAGTGCAAGCGAAGATGGCATTAGCAGAATTCGAAGATCGTTCTTTCCTTTTCGTCATGGTCGGGGATCCAAAAATGCAGTCCTTCCTTTGGAGAACGAggttta 1037 0.4417 MAMNQNPSHKLGYQALQPLKNHPEPASDSALPIFAIVVVSIMASVFLLISYFTFVTKCCSNWHQVNPLRWLSILRSRHDDDPLIALSPSVWNRGLDESVIREIPSFQFTKGVGENESADQSVYGCVVCLTEFQQHDMLKVLPNCSHAFHLDCIDIWLHTNANCPLCRSSISGTTRSPMDHIIAPSSSPQDSQLLSNMGSDEDFVVIELGGGEHGGILPQRQQERNDSRGSLAQSTSYSTTRKMEQKLGNSEPRKCHHVSIMGDECIDVRKKDDQFSIQPIRRSFSMDSATDRQAYLDVQAILQRNRHQNEASASEDGISRIRRSFFPFRHGRGSKNAVLPLENEV 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02714 345 MobiDBLite consensus disorder prediction 214 253 - -
Bva13g02714 345 SMART ring_2 125 166 IPR001841 -
Bva13g02714 345 Pfam Ring finger domain 125 167 IPR001841 -
Bva13g02714 345 PANTHER RING-H2 FINGER PROTEIN ATL16 3 342 IPR044600 GO:0016567|GO:0016740
Bva13g02714 345 MobiDBLite consensus disorder prediction 220 245 - -
Bva13g02714 345 ProSiteProfiles Zinc finger RING-type profile. 125 167 IPR001841 -
Bva13g02714 345 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 87 172 IPR013083 -
Bva13g02714 345 SUPERFAMILY RING/U-box 124 171 - -
Bva13g02714 345 CDD RING-H2_PA-TM-RING 125 167 - -
Bva13g02714 345 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 3 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02714 Bva-Chr13 19956474 19957511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02714 26 307 C3H Transcription Factor Family AT1G04360 46.053 3.20e-78 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02714 K19041 - gmx:100809883 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02714 13 19956474 19957511 Bva13g02714 13 19956474 19957511 ECH