Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02710 ATGGAACAAGACTCAAACTCAAAGGGAAAGTCCAAGGAAGAGGAGGCAAAAGGAACCAAATACAGAGGAGTGCGGCGGCGCCCGTGGGGGAAATATGCCGCCGAGATTCGAGACTCGGCGCGGCACGGAGCTCGCGTGTGGCTCGGAACATTTAATACAGCAGAGGAAGCAGCGCGAGCTTATGATCGCGCTGCCTTTGAGATGAGAGGTGCTTCGGCTATTCTCAACTTTCCACGCGAATATCCTTCTGCTTCAGCTTCTGGTTCTCATTCTCACTCctctttatcttcttcttcctcgtCGTCATCGACTTCAACACCGAACGCCGTTCCTGGTAAAGAGGTTTTTGAATTTGTCTGCATGGACGAAAAATTGTTGGAGGAACTTCTGGACTACGATAACACCATCAAGAGAGAGTG 419 0.4821 MEQDSNSKGKSKEEEAKGTKYRGVRRRPWGKYAAEIRDSARHGARVWLGTFNTAEEAARAYDRAAFEMRGASAILNFPREYPSASASGSHSHSSLSSSSSSSSTSTPNAVPGKEVFEFVCMDEKLLEELLDYDNTIKRE 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02710 139 MobiDBLite consensus disorder prediction 1 24 - -
Bva13g02710 139 ProSiteProfiles AP2/ERF domain profile. 20 78 IPR001471 GO:0003700|GO:0006355
Bva13g02710 139 MobiDBLite consensus disorder prediction 82 110 - -
Bva13g02710 139 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Bva13g02710 139 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Bva13g02710 139 PANTHER PATHOGENESIS-RELATED GENES TRANSCRIPTIONAL ACTIVATOR PTI5 8 94 - -
Bva13g02710 139 Gene3D AP2/ERF domain 19 79 IPR036955 GO:0003700|GO:0006355
Bva13g02710 139 SMART rav1_2 20 84 IPR001471 GO:0003700|GO:0006355
Bva13g02710 139 Pfam AP2 domain 19 70 IPR001471 GO:0003700|GO:0006355
Bva13g02710 139 PANTHER DNA-BINDING DOMAIN 8 94 IPR044808 GO:0003700|GO:0009873
Bva13g02710 139 MobiDBLite consensus disorder prediction 80 110 - -
Bva13g02710 139 CDD AP2 19 78 IPR001471 GO:0003700|GO:0006355
Bva13g02710 139 SUPERFAMILY DNA-binding domain 20 79 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02710 Bva-Chr13 19951198 19951617 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02710 17 131 AP2-EREBP Transcription Factor Family AT3G23230 61.017 9.57e-39 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva13g02710 AP2 1.5e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02710 - - zju:107405538 144.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02710 13 19951198 19951617 Bva13g02710 13 19951198 19951617 ECH