Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02706 ATGGAGGCTTTTGATATTTTGCCCGGAGGCTTTGATAATGCAACTCGGACCATCATGATTCTCTGGAAATGGACTAGAAGAAGAGGCTATAAAGTGTACAAAAGTGAAGAGGCTGACAAATTGGGACATCTGGCACCAGTTCTGCTGTTCGGATTCTGTGATTCCCTTTCCTTCGATATGGTGGACATGCAGTACTTCTCCACAGATCCACAACCACGACCTCATCCTCATCGGGCAGTGGAAGAAGCACCAACGTTGGAATTAGAGGAAAACAGTAATAAGCCAAAGCAAATACTAAAGAGCTCTCCTTCTGAAGCCGCAGTAGTCAACAACAAGAGCAAGGAAATATCGTATATCGGTGTGAGGAACAGACCTTGGGGGAAATTTGCGGCAGAGATCAGAGACACAACAAGGCATGGTGCCAGGGTTTGGCTTGGAACCTTTGACACTGCAGAGGCAGCAGCCTTGGCTTATGACCAGGCTGCTTATTCCATGAGGGGCCTAACTGCTATCCTTAATTTTCCGGTGGAAAGGGTTCGACAATCTTTGCGGGACAACATGTATGGCTGCAACAGAAGCTCATCGCCTGCACTAGCTCTCAAGGACAAACACCGCATTCAACGAAAATTGGTAGCAAAATCTCGGAAAAACAGAAGCAAGGCAACAAGCTTGGTGGAGCTAGAGGACTTGGGAGTTGACTATCTTGAGCAGCTTCTTGCAATTTCTGATCAAAATGCAAGCCCTAGCCattccaaata 758 0.4644 MEAFDILPGGFDNATRTIMILWKWTRRRGYKVYKSEEADKLGHLAPVLLFGFCDSLSFDMVDMQYFSTDPQPRPHPHRAVEEAPTLELEENSNKPKQILKSSPSEAAVVNNKSKEISYIGVRNRPWGKFAAEIRDTTRHGARVWLGTFDTAEAAALAYDQAAYSMRGLTAILNFPVERVRQSLRDNMYGCNRSSSPALALKDKHRIQRKLVAKSRKNRSKATSLVELEDLGVDYLEQLLAISDQNASPSHSK 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02706 252 CDD AP2 118 176 IPR001471 GO:0003700|GO:0006355
Bva13g02706 252 PANTHER DNA-BINDING DOMAIN 80 241 IPR044808 GO:0003700|GO:0009873
Bva13g02706 252 Pfam AP2 domain 118 167 IPR001471 GO:0003700|GO:0006355
Bva13g02706 252 ProSiteProfiles AP2/ERF domain profile. 117 175 IPR001471 GO:0003700|GO:0006355
Bva13g02706 252 MobiDBLite consensus disorder prediction 74 89 - -
Bva13g02706 252 Gene3D AP2/ERF domain 117 177 IPR036955 GO:0003700|GO:0006355
Bva13g02706 252 MobiDBLite consensus disorder prediction 69 104 - -
Bva13g02706 252 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 80 241 - -
Bva13g02706 252 SMART rav1_2 117 181 IPR001471 GO:0003700|GO:0006355
Bva13g02706 252 MobiDBLite consensus disorder prediction 90 104 - -
Bva13g02706 252 SUPERFAMILY DNA-binding domain 118 177 IPR016177 GO:0003677
Bva13g02706 252 PRINTS Ethylene responsive element binding protein signature 141 157 IPR001471 GO:0003700|GO:0006355
Bva13g02706 252 PRINTS Ethylene responsive element binding protein signature 118 129 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02706 Bva-Chr13 19923467 19924952 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02706 109 247 AP2-EREBP Transcription Factor Family AT3G23240 53.103 5.45e-46 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva13g02706 AP2 4.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02706 K14516 - gmx:100782036 204.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02706 13 19923467 19924952 Bva13g02706 13 19923467 19924952 ECH