Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02705 atgaaaaaaatggaTAGAGTTAACGTTGAAAGAACAGTACTAGAAGTTCGATACAGAGGGATTCGCAAGAGGCCATGGGGTAAGTTTGCGGCGGAGATTCGTGATCCAACCAGAAAAGGAACTCGCATATGGCTGGGAACCTTCGACACTGCAGAGCAGGCTGCTAGGGCTTATGATAGAGCTGCTTTTCATTTTCGGGGTCACAGAGCCATTCTCAATTTCCCCAATGAGTACCAGTCTTCTTCTATTCCGGCTGGACCCTCTTCATTGTTACCTCAGACCTACTCTTCTGCTTCATCTGTTTCTGGTGCTGCTGCTGTTTTAGCTAATGAATCAGCTGGGAATGCAGCTGATGCTGCTATGGAGTTTGAATTCTTGGATAACAAGTTGTTGGAAGAACTCCTTCAGGCCCAAAATGAATTAGatcatcattatcatcaaCACAATTG 449 0.4298 MKKMDRVNVERTVLEVRYRGIRKRPWGKFAAEIRDPTRKGTRIWLGTFDTAEQAARAYDRAAFHFRGHRAILNFPNEYQSSSIPAGPSSLLPQTYSSASSVSGAAAVLANESAGNAADAAMEFEFLDNKLLEELLQAQNELDHHYHQHN 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02705 149 CDD AP2 17 76 IPR001471 GO:0003700|GO:0006355
Bva13g02705 149 ProSiteProfiles AP2/ERF domain profile. 17 75 IPR001471 GO:0003700|GO:0006355
Bva13g02705 149 Pfam AP2 domain 17 68 IPR001471 GO:0003700|GO:0006355
Bva13g02705 149 PANTHER DNA-BINDING DOMAIN 9 136 IPR044808 GO:0003700|GO:0009873
Bva13g02705 149 PANTHER - 9 136 - -
Bva13g02705 149 SMART rav1_2 17 81 IPR001471 GO:0003700|GO:0006355
Bva13g02705 149 Gene3D AP2/ERF domain 16 76 IPR036955 GO:0003700|GO:0006355
Bva13g02705 149 PRINTS Ethylene responsive element binding protein signature 41 57 IPR001471 GO:0003700|GO:0006355
Bva13g02705 149 PRINTS Ethylene responsive element binding protein signature 18 29 IPR001471 GO:0003700|GO:0006355
Bva13g02705 149 SUPERFAMILY DNA-binding domain 17 76 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02705 Bva-Chr13 19911441 19911890 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02705 15 138 AP2-EREBP Transcription Factor Family AT3G23230 57.258 5.77e-41 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva13g02705 AP2 3.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02705 - - gmx:100779173 150.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02789 04 24056304 24056705 Bva13g02705 13 19911441 19911890 BWGD