Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02704 ATGGATTTAGATTCTTGCCCTAATTCCCTCTTCCAATGCCAAAACCTTGGATACTATCCTGCAACATATTCCTCTGTTTCTCCGGCAGAATCTGTGTCGTGGGacgatttctttttgttcaacGACCACAATATCGTCCCTTTCAACTTTGATAACTGCTTCGAAAACACGAACCTTTACGATGATGAAATCAAGGAATCATCTTCCGAACACAATTCTAATTCCTCCTCCGCTAGTGTTGAATCGCAAGAAGTGTCGTCCGAAGTAAAAGAATCACCCGCATCATCGCCGCCGGCAGAGGGAAAGAAGAGGCAGTACAGAGGAGTAAGGAGGCGGCCATGGGGGAAATTCGCGGCGGAGATAAGGGATTCCACTAGAAATGGGGTTCGAGTGTGGATCGGAACATTTGACACCGCGGAGGAAGCAGCTTTGGCTTATGATCAAGCAGCTCTGTGTACTCGAGGTTCACTGGCAGTGCTTAATTTTCCAGAGCAACTGGTGAGAGAATCACTCAAAGACATGCCAGGCATAGCCAAGCGAGGCGGAGGTGGAGATGGAGAtgcttcctcttcctcttgcTCGCCAGTGTTAGCACTCAAGAGAAAGCATTGTTTGAGAAAAAAGTCCAAAGCTGCTACTACAACAACAACTAGtcatagaaataaaaaggcGAAACGCGAATCCAGTCCTAGTTCCAGAAATGTGCTGGTGTTGGAAGATTTGGGTGCCGATTATCTTGAACAACTTTTGAGTTGCACTTCATCtcaaaatctcacttcttGGGCCTG 788 0.4315 MDLDSCPNSLFQCQNLGYYPATYSSVSPAESVSWDDFFLFNDHNIVPFNFDNCFENTNLYDDEIKESSSEHNSNSSSASVESQEVSSEVKESPASSPPAEGKKRQYRGVRRRPWGKFAAEIRDSTRNGVRVWIGTFDTAEEAALAYDQAALCTRGSLAVLNFPEQLVRESLKDMPGIAKRGGGGDGDASSSSCSPVLALKRKHCLRKKSKAATTTTTSHRNKKAKRESSPSSRNVLVLEDLGADYLEQLLSCTSSQNLTSWA 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02704 262 MobiDBLite consensus disorder prediction 207 233 - -
Bva13g02704 262 Pfam AP2 domain 105 155 IPR001471 GO:0003700|GO:0006355
Bva13g02704 262 SUPERFAMILY DNA-binding domain 105 164 IPR016177 GO:0003677
Bva13g02704 262 CDD AP2 105 165 IPR001471 GO:0003700|GO:0006355
Bva13g02704 262 Gene3D AP2/ERF domain 104 165 IPR036955 GO:0003700|GO:0006355
Bva13g02704 262 PANTHER DNA-BINDING DOMAIN 24 254 IPR044808 GO:0003700|GO:0009873
Bva13g02704 262 ProSiteProfiles AP2/ERF domain profile. 105 163 IPR001471 GO:0003700|GO:0006355
Bva13g02704 262 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 24 254 - -
Bva13g02704 262 PRINTS Ethylene responsive element binding protein signature 106 117 IPR001471 GO:0003700|GO:0006355
Bva13g02704 262 PRINTS Ethylene responsive element binding protein signature 129 145 IPR001471 GO:0003700|GO:0006355
Bva13g02704 262 SMART rav1_2 105 169 IPR001471 GO:0003700|GO:0006355
Bva13g02704 262 MobiDBLite consensus disorder prediction 70 93 - -
Bva13g02704 262 MobiDBLite consensus disorder prediction 65 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02704 Bva-Chr13 19908048 19909020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02704 79 261 AP2-EREBP Transcription Factor Family AT3G23240 46.995 1.84e-50 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva13g02704 AP2 7.5e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02704 K14516 - gmx:100780775 197.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02788 04 24052529 24053583 Bva13g02704 13 19908048 19909020 BWGD
Bva13g02704 13 19908048 19909020 Bva13g02704 13 19908048 19909020 ECH