Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02698 atggggaGAGCACCTTGCTGCGAGAAAATGGGATTGAAGAAAGGGCCATGGACTCCAGAAGAAGATCTCATACTCATCAATTATATCAACGCCAATGGCCATAACAACTGGCGTGCACTTCCCAAACAAGCTGgCTTGTTAAGGTGTGGAAAGAGTTGCAGACTCCGGTGGACTAATTATTTGAGGCCAGATATCAAGCGGGGAAATTTTACCGGAGAAGAAGAGGATACCATAATCAGGTTGCATCAAATGTTAGGAAACAGATGGTCAGCTATTGCAGCAAGGTTACCCGGACGCACAgataatgagataaaaaatgtatGGCACACCCACTTGAAGAAGAGGCTCCCACAATACCAACAGAACCAAGACAAAAGACGAACCCCAAAGCAAATAGCCAGCTCCAATCCCTCATCAAACCAAGACACCGAAAAAGAACAAGACCTTGTGAGCGTGAGCCTTCCAAGCcatgtgaaaaatgaaaacaccGAGAATAGGCCACTTTCTCCACCACAGTGTTCTTCTAGTGATATCTCCACCCTCACCACAAGTGACAACATTGACCATAACAGTACCACTGCACCGACTGAGAATGTTCCCTCGTTGGATGTCGATTTCTGGTCGGAAGTGCTTTCGGCTGATAATTCCGGTGAGACGAGCGATTTGCCGGCCATCTTTTCTGACCAGCAGTTTTTTCGGTTCCCGTTATCTTCATTGGTGACAAGCGAACTAGAAAGTGCTACCAGCTCATCAAGTTCAAGCATGTGTGATGGCATGGACTTTTGGTATAACATTTACACAAGAGCAGGGGAATCAGCAGAACTACCAGGATTTGATCTTGACTATGCTCATTCTTA 857 0.4376 MGRAPCCEKMGLKKGPWTPEEDLILINYINANGHNNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTGEEEDTIIRLHQMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLPQYQQNQDKRRTPKQIASSNPSSNQDTEKEQDLVSVSLPSHVKNENTENRPLSPPQCSSSDISTLTTSDNIDHNSTTAPTENVPSLDVDFWSEVLSADNSGETSDLPAIFSDQQFFRFPLSSLVTSELESATSSSSSSMCDGMDFWYNIYTRAGESAELPGFDLDYAHS 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02698 285 MobiDBLite consensus disorder prediction 115 199 - -
Bva13g02698 285 CDD SANT 69 112 IPR001005 -
Bva13g02698 285 Gene3D - 11 67 - -
Bva13g02698 285 CDD SANT 16 61 IPR001005 -
Bva13g02698 285 Gene3D - 69 148 - -
Bva13g02698 285 MobiDBLite consensus disorder prediction 122 199 - -
Bva13g02698 285 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Bva13g02698 285 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bva13g02698 285 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bva13g02698 285 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bva13g02698 285 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bva13g02698 285 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Bva13g02698 285 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 271 - -
Bva13g02698 285 PANTHER MYB-RELATED TRANSCRIPTION FACTOR LBM1 1 271 - -
Bva13g02698 285 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bva13g02698 285 SMART sant 66 114 IPR001005 -
Bva13g02698 285 SMART sant 13 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02698 Bva-Chr13 19885073 19886826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02698 1 278 MYB Transcription Factor Family AT2G31180 48.582 5.90e-82 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva13g02698 Myb_DNA-binding 4.6e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02698 K09422 - gmx:100775603 323.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02698 13 19885073 19886826 Bva04g02782 04 24033252 24035020 BWGD
Bva13g02698 13 19885073 19886826 Bva13g02698 13 19885073 19886826 ECH