Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02687 ATGACTCAACATGTCCGAAGTCATGAGACCAATTCCTCTGTTGTATCAGTGAATGTTTACACTAGTGCTTCTGTTCATTTAAGGCCATCTGCTCCACCCCTTCCTGTTCCTGATGAGATTTTAGCTGGTGAACTCAGCCCATTGGATCTTCATGATCCATCAACCAATGGTGGTGATGGTGCTTCATGTGTGATATGCTGGGAAGCTCCCATTAAGGGTGCATGTGTAGCTTGTGGCTATATGGCTGGTTGCACATCTTGTCTGAAGGAGATCAAAGCTAACAAAGGAGTTTGCCCCATTTGCCGGACCACAATAGACCAGGTTATCAGGCTTTTTGCAGTCTA 344 0.4564 MTQHVRSHETNSSVVSVNVYTSASVHLRPSAPPLPVPDEILAGELSPLDLHDPSTNGGDGASCVICWEAPIKGACVACGYMAGCTSCLKEIKANKGVCPICRTTIDQVIRLFAV 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02687 114 ProSiteProfiles Zinc finger RING-type profile. 63 102 IPR001841 -
Bva13g02687 114 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 55 113 IPR013083 -
Bva13g02687 114 PANTHER OS05G0521000 PROTEIN 55 114 IPR044586 GO:0004842
Bva13g02687 114 Pfam Zinc finger, C3HC4 type (RING finger) 62 108 - -
Bva13g02687 114 SUPERFAMILY RING/U-box 62 108 - -
Bva13g02687 114 PANTHER AUXIN-REGULATED PROTEIN-LIKE PROTEIN 55 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02687 Bva-Chr13 19836247 19836591 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02687 58 111 C3H Transcription Factor Family AT3G06140 33.333 9.85e-08 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02687 - - lang:109334987 115.931