Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02686 ATGCATATAGGTCAAAGTGATACGACTTCAGTAAAATGCCTTATCAATAGCATTTCTCGATTCGTTCTTCTAGTTTCTTGCCAGAGAGGGAAACCTATACCCGTTGGAAAGAACTATAGTAATATGGTTGGTGTGTTAAAGCGTTTGAAGCCATTTCTTGATGATGTTGTTGATTATAAAATCCATTCAGATGAAATTCTATGTAAAGGTTGTGAAGAACTGGATATGGTTGTTAATGAAGCTAGAGAGTTTATGGAAAAATGGTGCCCAAAGACGAGCAAGATTCATACCGTTCTACAAAATGGACGATTATTGATGAGAATTCAGAGCTCTTCGCTTGAGATTTGTCACATTATATTTAGATCCCTACAGTCAACTCCATCTACTTCAATTTCAGCTAGTCTTCAGCACTATATGCAGGAACTTCAGTCTTTGAGGAAGGAACCAGCAACTATCTATATAGAAGAGGCACTGAGAAAACAAACAGAAGATGGTAAATGTTGCAACGAAGATGTTAAGAATATTATTGAGTTACTTAGCTTGAAATCAAACCAGGAACTCTTGAAAGAAAGTATTGGTGTGGAAAAGGAAAGATTGAATGCTGAagccaataaaaagaaagggcAATTAGATGAAATTAACCAAATTGTAAGTCTTGTCTGCAAAGTACGTGATTATGCTATGAAATTTGAGTGCCTCGAAGTCAAACGTGGTGTCTCAGTCCCTCCATACTTCCGCTGTCCTTTATCTCTGGAACTCATGTTGGATCCTGTTATCGTGGCTTCAGGTCAGACATATGAGAGGCTGTCCATACAAAAGTGGCTTGATCATGGCTTGGCTGTTTGTCCCAAGACTCGTCTGAGACTTACCCATACAAATCTCATTCCCAATTATACTGTCAAAGCTATGATAGCAAATTGGTGCGAGGAAAACAATGTCAAACTTCCCAGTAACTCTGTTCACAATAATTCTGTCTGTGTCACATCCCCCTCAGGTGATTTATTGCCTCAAAATTTAGCTTGTGAGAATAGTTTTGGATCTTTACATATTAGCAATTCCACATCAAGATCATCCGATCAAACTAGTAATGCATTTGAGCAGCCAAAGGGTGATATCTCTTCCAGATTAAGTGGAGAATCCAATGGATGCCAGAGtggagaaatagaaaaatttgagCAACAATCTCTTGCACCTTCGTATGTTTACAGCAGAAGTGAATCATTCTCAAGTTCTGTTTCTAGTACCGATTATATACTTCCTGTTTCAAAAGAGTTGTCAGGGATATCCAGTAAGCGTGAAAATGTGCATCAGTTGTCTGGAGAAATCACAAATGGTGATCCTGCTTCTTCTCCTGCAAATAAAGAGTCGGGGAGTTCTCCTCAGTTATCAGGAAAGCAATTTGTACAGCCTGGACCAAAAATGGGCGTAGTAGAGAATGGAAATAATAATAGTCTTTCTAGAGGCAATTCCCCTCCTGTTTTTAACTTGGGATCCAATGAGTTGACCACATCTCATGTGAATAAGTTGATTGAAGACCTTCACAGCCAATCAAATGAAGTGCAAACTAGGGCCGCAGAAGAATTGAGGTTCCTTACAAAGCATAGCATGGAAAACCGTATAATTATTGGCCAGTGTGGAGCTATCGTGCCTTTACTTTCGCTGCTATATTCAGATAAGAAACTCACACAAGAGCATGCTGTGACAACTTTGctgaatttatcaattaatgaaGACAACAAGGCGTTGATTTCTGAAGCAGGAGCAATAGAACCTCTTATTTATGTTCTGAAAACGGGAAATGATGGAGCCAAGGAGAATTCTGCTGCAGCTCTATTCAGCCTTTCTgtgatagagaaaaataaggaaaagatTGGTCGTTCTGGTGCAGTTAAAGCTTTGGTGGATCTTCTAGGCTCAGGAACTCTTAGAGGAAGGAAAGATGCTGCTACTGCTTTATTTAACCTATCAATCTTTCACGAGAATAAAGCTCGTATAGTTCATGCTGGAGCTGTGAAGTATCTGGTTCAGTTAATGGACCCTGCTGATGGAATGGTTGACAAGGCTGCTGCTCTTCTGGCAAACCTGTCGACAATTCCAGAGGGCCGGTTAGCAATTGCAAGGGAAGGAGGCATCCCCTCATTGGTTGAAATTGTTGAATCAGGTTCCCAGAGGGGAAAGGAAAATGCTGCGTCCATTCTCTTGCAACTATGCCTTCATAGTCCAAAGTTTTGTACCCTGGTTCTGCAAGAAGGAGCTGTCCCTCCCCTAGTTGGATTATCTCAGTCTGGTACACCGCGAGCAAAGGAAAAGGCACAACAGCTTCTCAGTCATTTTCGTAATCTACGGGAAGGAGCAACAGGGAAGGGGAAATCATA 2375 0.3954 MHIGQSDTTSVKCLINSISRFVLLVSCQRGKPIPVGKNYSNMVGVLKRLKPFLDDVVDYKIHSDEILCKGCEELDMVVNEAREFMEKWCPKTSKIHTVLQNGRLLMRIQSSSLEICHIIFRSLQSTPSTSISASLQHYMQELQSLRKEPATIYIEEALRKQTEDGKCCNEDVKNIIELLSLKSNQELLKESIGVEKERLNAEANKKKGQLDEINQIVSLVCKVRDYAMKFECLEVKRGVSVPPYFRCPLSLELMLDPVIVASGQTYERLSIQKWLDHGLAVCPKTRLRLTHTNLIPNYTVKAMIANWCEENNVKLPSNSVHNNSVCVTSPSGDLLPQNLACENSFGSLHISNSTSRSSDQTSNAFEQPKGDISSRLSGESNGCQSGEIEKFEQQSLAPSYVYSRSESFSSSVSSTDYILPVSKELSGISSKRENVHQLSGEITNGDPASSPANKESGSSPQLSGKQFVQPGPKMGVVENGNNNSLSRGNSPPVFNLGSNELTTSHVNKLIEDLHSQSNEVQTRAAEELRFLTKHSMENRIIIGQCGAIVPLLSLLYSDKKLTQEHAVTTLLNLSINEDNKALISEAGAIEPLIYVLKTGNDGAKENSAAALFSLSVIEKNKEKIGRSGAVKALVDLLGSGTLRGRKDAATALFNLSIFHENKARIVHAGAVKYLVQLMDPADGMVDKAAALLANLSTIPEGRLAIAREGGIPSLVEIVESGSQRGKENAASILLQLCLHSPKFCTLVLQEGAVPPLVGLSQSGTPRAKEKAQQLLSHFRNLREGATGKGKS 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02686 791 MobiDBLite consensus disorder prediction 428 465 - -
Bva13g02686 791 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 587 629 IPR000225 GO:0005515
Bva13g02686 791 CDD RING-Ubox_PUB 245 286 IPR045210 -
Bva13g02686 791 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 546 588 IPR000225 GO:0005515
Bva13g02686 791 SUPERFAMILY ARM repeat 505 778 IPR016024 -
Bva13g02686 791 Gene3D - 493 785 IPR011989 -
Bva13g02686 791 PANTHER U BOX DOMAIN-CONTAINING 11 785 - -
Bva13g02686 791 Pfam Armadillo/beta-catenin-like repeat 537 574 IPR000225 GO:0005515
Bva13g02686 791 Pfam Armadillo/beta-catenin-like repeat 619 656 IPR000225 GO:0005515
Bva13g02686 791 Pfam Armadillo/beta-catenin-like repeat 576 615 IPR000225 GO:0005515
Bva13g02686 791 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 3 11 785 - -
Bva13g02686 791 Pfam U-box domain 241 312 IPR003613 GO:0004842|GO:0016567
Bva13g02686 791 Coils Coil 196 216 - -
Bva13g02686 791 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 240 315 IPR013083 -
Bva13g02686 791 SMART arm_5 576 616 IPR000225 GO:0005515
Bva13g02686 791 SMART arm_5 698 738 IPR000225 GO:0005515
Bva13g02686 791 SMART arm_5 658 697 IPR000225 GO:0005515
Bva13g02686 791 SMART arm_5 535 575 IPR000225 GO:0005515
Bva13g02686 791 SMART arm_5 617 657 IPR000225 GO:0005515
Bva13g02686 791 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 669 710 IPR000225 GO:0005515
Bva13g02686 791 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 628 670 IPR000225 GO:0005515
Bva13g02686 791 SMART Ubox_2 244 307 IPR003613 GO:0004842|GO:0016567
Bva13g02686 791 ProSiteProfiles U-box domain profile. 240 314 IPR003613 GO:0004842|GO:0016567
Bva13g02686 791 SUPERFAMILY RING/U-box 239 315 - -
Bva13g02686 791 MobiDBLite consensus disorder prediction 352 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02686 Bva-Chr13 19828088 19832529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02686 7 791 U-box Gene Family AT3G54790 55.164 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02686 - - gmx:100800949 1068.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02686 13 19828088 19832529 Bva13g02686 13 19828088 19832529 ECH