Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02675 ATGGATTCTGCGAGGAGTTGGTTTCATAAGTTTCAGCCACGGGATAGAATGAGGACATCCTCAAGGAAGAAGGACGATGATTCTATTGGAAAAGAGGTTACAAATGCACAGGAGGATGAAGAAGCTCTTTCCAGTGTCACAAAACAGAAGGTTGCGGCAGCAAAGCAATACATAGAGAACCATTATAAGGAGCAAATGAAGAACCTTCAAGAGAGGAAGGAGCGTCGAaataatttggaaaagaaGTTGGCTGATGCTGATGTCTCGGAGGAAGATCAAAACAACCTGCTCAAGTTTttggagaaaaaggaaactgaATATATGCGCCTTCAAAGGCATAAAATGGgtgttgatgattttgaattattgaCTATGATTGGAAAAGGTGCATTTGGAGAGGTTAAAGTCTGTAGGGAAAAGACAACAGGTCATGTGTATGCAATGAAAAAACTGAAGAAATCAGAGATGCTTCGTAGAGGCCAGGTAGAGCATGTCAGAGCTGAAAGGAATCTCCTTGCAGAGGTTGATAGCAATTGTATTGTCAAACTTTACTGCTCTTTCCAGGATGAAGAGTATCTTTATCTTATTATGGAGTATCTACCGGGTGGGGATATGATGACTCTACTCATGAGAAAGGATACCTTAACTGAAGATGAAGCCAGATTTTATGTAGGAGAAACAGTTCTGGCTATTGAATCTATACATAAACACAATTATATCCATAGGGATATTAAGCCTGATAACTTGTTACTTGACAGATACGGGCATTTGAAACTGTCAGATTTTGGACTATGTAAACCGTTAGACTGTAGTACACTACAAGAACAAGATTTTTCTGTTGGTCAAAATGCAAATGGATCTACACAGAATGATGAGCGCTCTGCTCCAAAACGCACTCAACAAGAACAATTACAACACTGGCAAAAGAACAGGAGGACACTTGCTTATTCTACTGTTGGTACACCAGACTATATTGCTCCAGAAGTTCTTTTGAAGAAAGGTTATGGGATGGAATGTGACTGGTGGTCACTTGGAGCTATTATGTATGAAATGTTGGTTGGATATCCGCCTTTTTATTCCGATGATCCAATGTCAACATGTAGAAAGATAGTAAACTGGAAATCTCACTTGAAATTTCCTGAAGAAGCAAGGTTATCTCCTGAGGCTAAAGATCTTATCAGTAAACTTTTGTGTAACGTCAGCCAGAGACTAGGTTCAAACGGCGCTGTTGAAATTAAGGCTCATCCTTTCTTCGGAGGTGTTGAGTGGGATAAACTATATCAAATGGAAGCTGCTTTTATTCCTGAGGTCAATGATGAGTTAGAtactcaaaattttgaaaagtttgaAGAGTCCGACAGTCAGAGTCAACCATCATCGAGATCTGGTCCATGGAGGAAGATGCTTTCATCTAAGGACATAAATTTTGTGGGATACACATATAAGAACTTCGAAATCGTCAATGACTATCAAGTTCCTGGGATGACtgaattgaagaagaaaaccacCACATCAAAAAGGCCATCCATCAAAACACTTTTTGATGATGAGTCAGATGTATCAGAGGTGCCTGAGGCTTCAGATGCGTCTGCAAGCAAGCAATCTTCCCAAGGAAGCTTTCTAAATCTCTTGCCACCCCAACTAGAGGTATCCCGTAGCCGTAGCGAGAAGGAATCCTCCTCCTA 1685 0.3858 MDSARSWFHKFQPRDRMRTSSRKKDDDSIGKEVTNAQEDEEALSSVTKQKVAAAKQYIENHYKEQMKNLQERKERRNNLEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVKVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHLKLSDFGLCKPLDCSTLQEQDFSVGQNANGSTQNDERSAPKRTQQEQLQHWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWKSHLKFPEEARLSPEAKDLISKLLCNVSQRLGSNGAVEIKAHPFFGGVEWDKLYQMEAAFIPEVNDELDTQNFEKFEESDSQSQPSSRSGPWRKMLSSKDINFVGYTYKNFEIVNDYQVPGMTELKKKTTTSKRPSIKTLFDDESDVSEVPEASDASASKQSSQGSFLNLLPPQLEVSRSRSEKESSS 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02675 561 Gene3D Transferase(Phosphotransferase) domain 1 204 270 - -
Bva13g02675 561 Gene3D Transferase(Phosphotransferase) domain 1 313 436 - -
Bva13g02675 561 MobiDBLite consensus disorder prediction 281 306 - -
Bva13g02675 561 Gene3D Phosphorylase Kinase; domain 1 118 203 - -
Bva13g02675 561 Gene3D Phosphorylase Kinase; domain 1 437 447 - -
Bva13g02675 561 Coils Coil 59 89 - -
Bva13g02675 561 MobiDBLite consensus disorder prediction 525 549 - -
Bva13g02675 561 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 22 526 - -
Bva13g02675 561 PANTHER SERINE/THREONINE-PROTEIN KINASE 22 526 - -
Bva13g02675 561 Pfam Protein kinase domain 121 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02675 561 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Bva13g02675 561 MobiDBLite consensus disorder prediction 500 561 - -
Bva13g02675 561 SUPERFAMILY Protein kinase-like (PK-like) 93 472 IPR011009 -
Bva13g02675 561 MobiDBLite consensus disorder prediction 1 45 - -
Bva13g02675 561 SMART serkin_6 120 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02675 561 Pfam Protein kinase C terminal domain 437 481 IPR017892 GO:0004674|GO:0005524|GO:0006468
Bva13g02675 561 MobiDBLite consensus disorder prediction 1 38 - -
Bva13g02675 561 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Bva13g02675 561 MobiDBLite consensus disorder prediction 500 518 - -
Bva13g02675 561 SMART pkinase_C_6 419 483 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bva13g02675 561 ProSiteProfiles Protein kinase domain profile. 120 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02675 561 CDD STKc_NDR_like 118 482 - -
Bva13g02675 561 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 491 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02675 Bva-Chr13 19747803 19754130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02675 1 550 AGC Kinase Gene Family AT3G23310 75.769 0.0 863
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Bva13g02675 Pkinase 5.6e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02675 K08790 - jre:108982626 959.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02675 13 19747803 19754130 Bva04g02765 04 23935087 23941962 BWGD
Bva13g02675 13 19747803 19754130 Bva13g02675 13 19747803 19754130 ECH