Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02674 ATGATCAGATCCCATGTGCATGAATCCTGGGACTACCCAAATTTCGGGTTGTCAGCTCCAACCTCATCAAACCCATTTACAAAGTCAACAATTGATAACCATTGCGTACACATGGTGCAGAACGAGGTCTCTGATTGGATGGAGCAATTTACCAAACACCTTGTGGATGACATGCCAGAAACCAGCACCGGTAACTTTGAGGCTAATAACCAAACAAGGGCGAACCAGAACAACTTTGTTCCCTCAATTTCAGCCAGTAACTTCAATCTAAGAAAACCCACATGGAGAACCCAGTTTGATCCCTACAGTAATGACCTTCGAAGCAGCAATCTTGAACTTCACATTCAAACAAACACTTCAGAAAACAACCCCAACAATCATGAGTTGAACCTGATAACCCTTTTAATGGAGTGTGCAGTAGCAATCTCTGTTGAAAACCTTGGTGAGGCCCACAGAATGTTACTTGAGTTAACACCAGTAGCCTCACCTTACAAGCCATCTTGTGCCGAGAGAGTTGCTGCCTATTTTGCTAAGGCCATGGCTAGTAGGGTGATGAATTCCCGGCTTGGAATATGCTTCCCCTTGATTGATCACAGAAGCCTTCATTCTGCATTCCAAGTGTTCAACAATATTTCCCCTTTCATAAAGTTTGCTCATTTCACTTCCAACCAGGCTATCCTTGAGGCCCTGCACGGCCGTGAAAATGTCCACATTATTGACTTAGACATCATGCAGGGTTTGCAATGGCCAGCCTTCTTGCACATACTAGCAACCAGAATGGAGGGTCCACCACATGTTCAAATGACAGGCATGGGAACTTCAATGGAGCTTCTGATTGAGACTGGAAAGCAGCTCTCCATTTTTGCCAAAAGGCTTGGAATGTCATTCAAGTTCCACCCAATTGCCAGAAAGTTTGGGGAAATTGATGCTTCAATGGTGCAAGTTAGGCCTGGCGAGACAATAGCTGTGCATTGGTTGCAGCACTCACTGTACGATGCAACCGGACCAGATTGGAAAACACTGAGACTTGTTGAGGAATTGGAGCCAAGAATTGTGACTCTGGTGGAGCAGGATGTTTCACATGGTGGGTCATTTTTGGATCGTTTTGTTGGCTCTTTGCACTATTACTCTACCCTTTTTGATTCTCTTGGAGCATATTTGCCGAGTGAGGACCCCAGCAGGCACCGTGTTGAGCATGGTCTTCTGTCTAGGGAGATCAACAATGTGTTGGCCATGGGAGGCCGTGCAAGGAGTGGGGAAGAAAAGTTTAGGCAGTGGAGGAGTGAGCTTGCAATCCATAGATTTGTGCAACTTCCCATGAGTGACAATTCAATGGCTCAAGCGCAATTGATACTGAACATGTTTTCACCAGCTCATGGCTATACACTTGCCCAAGTTGATGGAACACTAAGGCTTGGATGGAAAGGCACCAGTTTGTATACTGCTTCTGCATGGACCTGTGTTAATTCAAGGTA 1475 0.4549 MIRSHVHESWDYPNFGLSAPTSSNPFTKSTIDNHCVHMVQNEVSDWMEQFTKHLVDDMPETSTGNFEANNQTRANQNNFVPSISASNFNLRKPTWRTQFDPYSNDLRSSNLELHIQTNTSENNPNNHELNLITLLMECAVAISVENLGEAHRMLLELTPVASPYKPSCAERVAAYFAKAMASRVMNSRLGICFPLIDHRSLHSAFQVFNNISPFIKFAHFTSNQAILEALHGRENVHIIDLDIMQGLQWPAFLHILATRMEGPPHVQMTGMGTSMELLIETGKQLSIFAKRLGMSFKFHPIARKFGEIDASMVQVRPGETIAVHWLQHSLYDATGPDWKTLRLVEELEPRIVTLVEQDVSHGGSFLDRFVGSLHYYSTLFDSLGAYLPSEDPSRHRVEHGLLSREINNVLAMGGRARSGEEKFRQWRSELAIHRFVQLPMSDNSMAQAQLILNMFSPAHGYTLAQVDGTLRLGWKGTSLYTASAWTCVNSR 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02674 491 PANTHER OS05G0485400 PROTEIN 10 487 - -
Bva13g02674 491 ProSiteProfiles GRAS family profile. 122 486 IPR005202 -
Bva13g02674 491 Pfam GRAS domain family 131 486 IPR005202 -
Bva13g02674 491 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 487 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02674 Bva-Chr13 19744707 19746182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02674 137 486 GRAS Transcription Factor Family AT3G54220 56.022 1.22e-134 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva13g02674 GRAS 1.7e-104 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02674 - - gmx:100775656 708.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02674 13 19744707 19746182 Bva13g02674 13 19744707 19746182 ECH