Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02673 ATGGAGCACATAATTGCTGGGAAGTTTAAATTGGGAAGGAAAATTGGAAGCGGGTCTTTTGGGGAGCTTTATATAGGCGTCAATGTACAAACTGGAGAGGAGGTGGCCGTTAAGCTGgaACCTTTCAAGACCAGGCATCCACAGCTTCACTACGagtcaaaattatatatgctcCTTCAAGGAGGAACGGGGATTCCCCACATCAAGTGGTTTGGAGTTGAGGGAGACTACAATGTTATGGTTATTGACCTTCTTGGACCAAGTCTGGAAGACTTATTCAACTACTGCAATCGGAAGTTCACATTGAAGACAGTGTTGATGCTCGCTGATCAATTAATTAATAGAGTTGAGTATATGCATTCACGAGGTTTTCTTCACCGTGATATAAAGCCtgacaattttttaatgggCCTTGGCCGTAAAGCAAACCAGGTGTACATCATTGACTATGGCCTAGCGAAAAAGTATAGGGATCTTCAGACTCACAAGCACATACCATACAGagaaaacaagaacCTCACTGGCACGGCTCGCTACGCCAGTGTCAATACTCATCTTGGAATTGAACAAAGCAGAAGGGATGATCTTGAATCTCTTGGCTATGTGCTCATGTACTTCTTAAGAGGAAGtctTCCGTGGCAGGGATTGAAGGCTGgcaccaaaaaacaaaaatatgataagatCAGTGAAAAGAAGGTGTCAACTCCCATAGAGGTGCTCTGCAAATCGTATCCGTCTGAGTTTGTATCATACTTCCACTACTGCAGATCATTGCGGTTTGAGGACAAGCCAGATTATTCATATTTGAAAAGGCTTTTTCGAGACTTATTTATTCGAGAAGGCTATCaatttgactatatttttgaCTGGACCATATTGAAGTACCCACAGATTGGTGGTAGCTCTAGAGGGCGGCATGCCAGTGGTAAAGCAGCTATTAATGCAGGACCGTCTATGCAAAAGCCAGAAAAGACGTCAGTTGGAAAAGACATTCGAGAGAAATTCTCTGGTGCTGTTGAAGGATTTTCCAGGAGGAACCCCGCAAGTCCTCGTGGTGATCAAACCAAACATAGGACCTTTGAGGATGTACACAAGGATGTGCATCATGATCAAGAGAAGGGACGTAGTTCATCTCGATATGGCAGCACTTCAAGAAGAGCTATGAACTCATCAAACAAGACTAGTTCTGCTGACCATAGTGATAGCCGGACTGGGCGGCCGACTCCGGGTGGTAGCCGGCCGTCAACTCATAGAACTCAACCTTCCTATGAGAACAAACAATCAACTTTTACACGTGCTGGATCTACCAGAGGAAATCGAGACGATCCTCTCCGAAGCTTTGAGCTTCTCTCTATCAGGAAATA 1364 0.4208 MEHIIAGKFKLGRKIGSGSFGELYIGVNVQTGEEVAVKLEPFKTRHPQLHYESKLYMLLQGGTGIPHIKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFTLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYIFDWTILKYPQIGGSSRGRHASGKAAINAGPSMQKPEKTSVGKDIREKFSGAVEGFSRRNPASPRGDQTKHRTFEDVHKDVHHDQEKGRSSSRYGSTSRRAMNSSNKTSSADHSDSRTGRPTPGGSRPSTHRTQPSYENKQSTFTRAGSTRGNRDDPLRSFELLSIRK 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02673 454 MobiDBLite consensus disorder prediction 350 376 - -
Bva13g02673 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Bva13g02673 454 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02673 454 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 444 - -
Bva13g02673 454 MobiDBLite consensus disorder prediction 301 454 - -
Bva13g02673 454 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02673 454 Gene3D Transferase(Phosphotransferase) domain 1 1 336 - -
Bva13g02673 454 MobiDBLite consensus disorder prediction 438 454 - -
Bva13g02673 454 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02673 454 MobiDBLite consensus disorder prediction 325 339 - -
Bva13g02673 454 PANTHER CASEIN KINASE-RELATED 1 444 - -
Bva13g02673 454 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Bva13g02673 454 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Bva13g02673 454 MobiDBLite consensus disorder prediction 377 436 - -
Bva13g02673 454 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02673 Bva-Chr13 19737136 19742542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02673 8 213 MAP Kinase Kinase Kinase AT3G06030 25.000 1.34e-13 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Bva13g02673 Pkinase 3e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02673 K08960 - cam:101493293 797.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02763 04 23923767 23928710 Bva13g02673 13 19737136 19742542 BWGD
Bva13g02673 13 19737136 19742542 Bva13g02673 13 19737136 19742542 ECH