Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02662 ATGAAGTGTCTATGCTCAGGGGAGCAGTTAAGAAGAGTAGATGACATGGTTCCTTCATCTGAATCTCTTGCAACCAAGGATTATTCAGCAAGTGGGTCTTCTTCCCGTGCAGGGCAAGTTGACAAGAAGCCCGATACTGGCAATATAGAAGAAGCTGAATCATCTCTACGTGAGAGTGGTTTCCTGAACTATGAGGAAGCCAGAGCTCTGTTAGGAAGATATGAATATCAGAAAGGAAATATACAAGCTGCTTTACATGTTTTTGAGGGAATAGATATAGGTGCCGTGactcagaaaatgaaaataacccTCGCCAAAAGAGGAGAACGCCGTAAGAGACGTTCCCAGAATCTTGATACACCACCAATGTCGATACATGCTGTTGGCTTACTCTTGGAAGCAGCCCTTATAAAAGCAAAATGCTTGCAGGTTCTTGGAAGGTTTAAAGAAGCTGCCCTATCTTGCAAAGTTATTCTGGACATAGTTGAATCTTCATTACCTGAAGGCTTGCCAGAAAACTTTGGTGCTGAATGTAAATTGCAGGAGACTCTAAGCAAGGCAGTTGAGTTGCTTCCAGAATTATGGAAACTTGCTGATTGTCCACATGAAGGTATTTTGTCTTACCGGCGGGCACTTCTTCATCAATGGAATCTTGATGCAGAGACTACCGCAAAGATTCAGAaagaatttgttgtttttctcctATATAGTGGTGGGGAAGCAAGCCCCCCAAATCTCCGTTCCCAAATGGACAGCTCATTTGTACCCAGAAATAACATTGAAGAGGCCATACTTCTATTAATGATTCTGCTAAGAAAAGTCTCTCTCAAGAGAATTGAGTGGGATCCTTCCATTTTGGACCACCTTTCATTTGCTTTGTCTGTTTCTGGAGACTTGATAACTTTAGCCCATCAATGGGAAGAATTACTTCCGGGGATTATTGATCGAAGAGAAAGGTACTACTCTCTTGCCCTCTGTTATTTTGGAGCAGGTAAGGACTTGGTAGCACTGGATCTTCTGAGAAAATTGTTGAGTAGTAGAGAGGACCCAAGACATGTTAAAGCTTTGCTAATGGCATCTAAGATTTGTTGCGAGAAACCTACTCTTGCAGGAGAAGGGGTAAGCTTTGCTCACAGAGTACTTGAGAACTTGGATGGCAGATGTGATCAGTTGCAAGCTGTTGCCAATTGCCTACTTGGTGTTTCACTTTCAGCACATTCAAGATCTGCTGTTTCTGATTCTGAGAGGATAAAGAGACAATCTGAGGCACTTCATGCCCTGGAAATTGCAGGCAGATTGAGCAGAATGAGAGACCCTATTATACTATACTATATCAGTTTGCAACATGCAGAGCAAAGGGAGTTGGATGATGCATTTCATTACGGAAAGTGCCTTCTAGAACTGGAAGCTGGGTCTAATGTTAAAGGGTGGTTATTGTTGGCCAGGATTTTATCAGCTCAGAAAAGGTTTGCAGATGCTGAATCTATTACCAATGCCGCTTTGGATCAGACTGGGAAATGGGATCAAGGAGATTTGCTGCGAACAAAAGCTAAACTTCAAATTTCGCATGATCAATTAAGTGGTGCTATTGAGACATACACTCAGCTTCTCGCTATTcttcaaattaagaataaaagtttTGGTTCTGGGAAGAAGTTATATAAGGACAACAGAGATCATGCCAGGGAGTTGGAAGTGGAAGTATGGAATGATCTTGCTTATGTATACATTGGCCTGTCACAGTGGCATGATGTCGAGGTTTGTCTTTCCAAATCTAAGGCCATCAAACTGTACTCTGCAACTAGATGTCATGCAACAGGTAAACTCTATGAAGCAAGGGGCCTTTATAAGGAGGCTCTTAAAGCTTTTCAATATGCTTTGAGCATTGATCCGCACCATGTCCCAAGCTTAATCTCTACTGCTGGGGTTCTTAGAAGGTGTAGTGATAATTCAAATGATATAGTTAGAAGCTTTCTGACGGAAGCACTGCGGCATGATAGAACGAATGCTTCTGCTTGGTATAATCTTGGCCTTCTTTACAAGGCTGAGGGTTTAGCAGAAGCTGCAGAGTGTTTTCAAGCAGCACGCACTCTTGAAGAGTCTGAACCAGTTGAACCTTTCTG 2123 0.4145 MKCLCSGEQLRRVDDMVPSSESLATKDYSASGSSSRAGQVDKKPDTGNIEEAESSLRESGFLNYEEARALLGRYEYQKGNIQAALHVFEGIDIGAVTQKMKITLAKRGERRKRRSQNLDTPPMSIHAVGLLLEAALIKAKCLQVLGRFKEAALSCKVILDIVESSLPEGLPENFGAECKLQETLSKAVELLPELWKLADCPHEGILSYRRALLHQWNLDAETTAKIQKEFVVFLLYSGGEASPPNLRSQMDSSFVPRNNIEEAILLLMILLRKVSLKRIEWDPSILDHLSFALSVSGDLITLAHQWEELLPGIIDRRERYYSLALCYFGAGKDLVALDLLRKLLSSREDPRHVKALLMASKICCEKPTLAGEGVSFAHRVLENLDGRCDQLQAVANCLLGVSLSAHSRSAVSDSERIKRQSEALHALEIAGRLSRMRDPIILYYISLQHAEQRELDDAFHYGKCLLELEAGSNVKGWLLLARILSAQKRFADAESITNAALDQTGKWDQGDLLRTKAKLQISHDQLSGAIETYTQLLAILQIKNKSFGSGKKLYKDNRDHARELEVEVWNDLAYVYIGLSQWHDVEVCLSKSKAIKLYSATRCHATGKLYEARGLYKEALKAFQYALSIDPHHVPSLISTAGVLRRCSDNSNDIVRSFLTEALRHDRTNASAWYNLGLLYKAEGLAEAAECFQAARTLEESEPVEPF 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02662 707 ProSiteProfiles TPR repeat profile. 600 633 IPR019734 GO:0005515
Bva13g02662 707 SUPERFAMILY TPR-like 511 684 IPR011990 GO:0005515
Bva13g02662 707 MobiDBLite consensus disorder prediction 16 54 - -
Bva13g02662 707 Gene3D Tetratricopeptide repeat domain 303 504 IPR011990 GO:0005515
Bva13g02662 707 Gene3D Tetratricopeptide repeat domain 505 638 IPR011990 GO:0005515
Bva13g02662 707 Gene3D Tetratricopeptide repeat domain 654 705 IPR011990 GO:0005515
Bva13g02662 707 SMART tpr_5 317 350 IPR019734 GO:0005515
Bva13g02662 707 SMART tpr_5 510 543 IPR019734 GO:0005515
Bva13g02662 707 SMART tpr_5 566 599 IPR019734 GO:0005515
Bva13g02662 707 SMART tpr_5 474 507 IPR019734 GO:0005515
Bva13g02662 707 SMART tpr_5 132 165 IPR019734 GO:0005515
Bva13g02662 707 SMART tpr_5 670 702 IPR019734 GO:0005515
Bva13g02662 707 SMART tpr_5 600 633 IPR019734 GO:0005515
Bva13g02662 707 PANTHER PROTEIN NPGR2 1 707 - -
Bva13g02662 707 PANTHER PROTEIN NPG1 1 707 IPR043376 -
Bva13g02662 707 SUPERFAMILY TPR-like 315 502 IPR011990 GO:0005515
Bva13g02662 707 MobiDBLite consensus disorder prediction 22 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02662 Bva-Chr13 19671220 19676368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02662 1 707 Calmodulin-binding Proteins AT4G28600 58.645 0.0 781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02662 13 19671220 19676368 Bva04g02751 04 23881619 23886002 BWGD
Bva13g02662 13 19671220 19676368 Bva13g02662 13 19671220 19676368 ECH