Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02654 ATGACAGCCATTCAAAAGGCTTCTGTTTTTCTCTATCATTTTATTCTCTTGCTTTCCTATCACCCCTTAAAGATCACAGCATCACCAAGAACAGAAGCAGAAGCTCTTGTCAAATGGAAACACAGCCTACCTCAgcctcttccttcttctctcaATTCATGGTCCTTTACCAACGTCAGCAACCTATGCAGCTGGTATGCCATTGTTTGTGATAGCAGCAATACAACAATCTCAGAGATAAACCTCTCCGGTGCCTATCTCAATGGGACCCTCACTGGGttggaatttttttcctttccaaatCTCACTCGCCTCAACCTGAATACCAACTATTTTAGTGGGGCAATACCATCTGCAATTGGTAATCTCTCCAGTCTAACTTTCTTGAACCTGGGAAATAACCTCTTTGAACATACACTACCATCACAGCTAGGCCAGCTGAAGGAGCTACAATATCTGGATTTGTACAACAACAGTTTCAGTGGTAACATCCCCTATCAGCTCACAAATCTTCCAAAACTATGGTACCTAGACCTTGGATTCAACCACTTTACATCTCCTCCGGACTGGTCCCAATATTCAGCCATGTCTTCCTTAACCCACCTCAGTTTGGCTCTCAATAATTTCAATTCTGACTTCCCTAGTTTTGTACTGGATTGCCAGAACTTGACATATCTTGACTTGTCTCAAAACCCCCTAAGCTTAATACCAGAATCATTGTATACAAGTCTGGGAAAGCTTGAATACCTGAATCTCACAAACTGTGGGATAGATGGACCACTGCCATCAAACTTTTCAAAGCTTTCTAATCTGAAAGAACTCCGCCTGGGAGTTAACAAGTTTACTGGTCCCCTTCCTGCATCCTTAGGATTGATATCAGGACTTCAGTtacttgaattgaatgagAACGAACTCCATGGGGAAATCCCTGCCTCTTTAGGCCACCTCAGGCAGCTTTGGCATCTTGATCTCCATGagaattttttgaattctaCTGTCCCTACTGAGCTTGGCTTCTGTATTAATCTGACCTACTTGAGTTTGGCAGTAAATACTCTGACTGGTCCCTTGCCTTTGTCATTATCCAATCTCACCAAGATAGCAGAACTGGGATTGTcaggtaatttttttacaggtcagatttcttcttcattgatCTCTAACTGGACTGACTTGGTCTCTCTGCAACTTCAAAACAATACATTCACAGGTGAAATTCCTGAAGAGATCGGActcttgaaaaaaataaacatccTCTTTCTTTACAGAAATCACTTCTCTGGTCCTATTCCAGCAGGGATTGGAAACTTGAAAGCTTTGATAAAATTAGACCTTTCACGAAACCAATTATCTGGTCCTCTTCCTTCAAGCATATGGAATCTTACAAACATTCAAGTCATAAATCTTTTCTTCAATAATCTCTCTGGAACCATTCCCATGGATATCGGAAACTTGTcctctctaaaattttttgatgtCAACACTAATTTTTTGCAAGGAGAGTTACCAGAAACCATATCTCAGCTAACTCAGCTAACATCAATTTCTGTTTTCAGTAATAATTTTTCGGGCAGCATTCCCAGATATTTTGGGAAGAATAGTCCGAATCTTGCTCGTGTCAGCTTTTCAAAAAACAGCTTCTCTGGAGAACTGCCGCCTGATTTGTGCAGCGGATTCGTACTTGAAGTTATAACAGTGAATAACAACAGCTTTTCTGGGCTACTGCCAAAGTGCTTGAGAAATTGTTCAAAGCTAACTAGAGTTCGGCTTGATAGAAATCAGTTCACTGGAAACATCACAGAAGCATTTGGGATTCACCCAGAGCTTGATTTCATCTCAATCAGTCGCAATCAGTTTGTTGGTGAGCTCTCTCCTCAGTGGGGTGAATGTGTAAAGTTAACCAGAATGGAGATGGATAGAAACAATCTTTCTGGGGAAATTCCACCTGAGCTGGGTGAGCTAAAAGAATTACACTATCTAAACCTACATTCCAATGAACTCACCGGCAATATCCCTCCTGAACTAGGAAATCTTAGACTGCTGTACATGTTCAACTTGAGCAGAAACCATTTGGCAGGAGACATTCCACAGAGTATGGGGAAATTAGCTCAGCTTGAATCTCTTGACTTATCGGATAACAATTTCACCAGTAGCATACCCGTAGAACTCGGTAACTGTCGCAAATTACTGAGCTTGAATTTGAGCCAGAACAATCTATCTGGTGAAATACCCCCAGAACTTGGCAATCTTTTCTCACTAAGCTACATGTTGGACCTCAGCAGCAACTCTCTTTCAGGCCGAATTCCTCAAAACCTTCAAAAGCTTACTATTTTGCAGTTTCTCAATGTGTCACATAACCACCTTTCAGGAGCAATCCCTCAATCGTTTTTAAACATGGTCAGTCTTCAGTCTGTTgatttttccttcaacaaCTTGACAGGTTCAATCCCAACTGGCAGTATTTTCCAAAAAGCACAAGCTGGAGCTTATGTCGGAAACTCAGGCTTGTGTGGGGAAGCAGAAGGTTTAACTCGTTGCTCTCCATACAAGTCAGAAGGGTTAAACAAAAAGGTTCTTCTTGGTGTTATTATGCCAGTTTGTGTGCTATCAATGATGGGGATAATTGCTGTAGGAATTGTAGTATCCCACAGGCACGTCAAACTTTTTGACGAAGAGATGAGAGGTACTGAAAACATTGACAAATCTAAAAGCATAGTATGGGGAAGAGATGGAAAATTCACATTAGCAGAAATTAGCAAGGCCACAGATAATTTCAACGACAAGTACTGCATTGGAAAAGGAGGATGCGGAAGCGTCTACAGAGCAGAATTATCCAGAGGTCTAGTTGTTGCAGTAAAGAGGCTCCATTTGACAGAGTCTAGTGACACTCCAGTAAGAAATCACCAGAGCTTTGAGAATGAGATTGCAGCTCTTACAGAAGTGAGGCACCGCAACATCATAAAGCTTTATGGGTTCTGTTCCAACAGGGGAAACATGTACCTGGTATATGAACACATTGACAGAGGTAGTTTGAGAAAAGTGCTGTATGGGGATGAAGGGTCATTGGAGCTAAACTGGCGTACAAGGGTGAAAATTGTGCAAGGAATAGCACATGCACTTGCTTACCTGCACAGTGACTGTTCCCCACCAATTGTGCACAGAGATGTGACATTGAACAACATATTAGTGGACTCAGAATTTGAACCTCGCCTTGCAGATTTTGGCACAGCAAAGTTGCTCAGCACCAATACAACAAGCTGGACCTCAATTGCTGGGTCGTATGGTTACATGGCTCCAGAGCTAGCACAAACAATGAGAGTCACGGAAAAGTGCGATGTGTTCAGCTTTGGGGTGGTGGCACTGGAGATAATGATGGGGAAGCACCCAGGAGATCTCTTGGCTTCTCTATCATCTTCCTCAATGATGGATTCGCAGATGCATCTGAAGGATGAGTTAGACCAGAGGCTTCGACCTCCAAGTGGGAAATTAGCTAAAGCAGTAGCGTTCGTAGTAACAATAGCTTTGGCATGCACGCGTGACACTCCAGACTCGAGACCGACCATGCGTTATGTGGCACGAGAGCTATCAGCTAACAAACTGGCTTGTTTCGCTGAGCCCTTTTGTATGCTCACCATTGCCAAACTAACGGGGTATCAGTA 3659 0.4094 MTAIQKASVFLYHFILLLSYHPLKITASPRTEAEALVKWKHSLPQPLPSSLNSWSFTNVSNLCSWYAIVCDSSNTTISEINLSGAYLNGTLTGLEFFSFPNLTRLNLNTNYFSGAIPSAIGNLSSLTFLNLGNNLFEHTLPSQLGQLKELQYLDLYNNSFSGNIPYQLTNLPKLWYLDLGFNHFTSPPDWSQYSAMSSLTHLSLALNNFNSDFPSFVLDCQNLTYLDLSQNPLSLIPESLYTSLGKLEYLNLTNCGIDGPLPSNFSKLSNLKELRLGVNKFTGPLPASLGLISGLQLLELNENELHGEIPASLGHLRQLWHLDLHENFLNSTVPTELGFCINLTYLSLAVNTLTGPLPLSLSNLTKIAELGLSGNFFTGQISSSLISNWTDLVSLQLQNNTFTGEIPEEIGLLKKINILFLYRNHFSGPIPAGIGNLKALIKLDLSRNQLSGPLPSSIWNLTNIQVINLFFNNLSGTIPMDIGNLSSLKFFDVNTNFLQGELPETISQLTQLTSISVFSNNFSGSIPRYFGKNSPNLARVSFSKNSFSGELPPDLCSGFVLEVITVNNNSFSGLLPKCLRNCSKLTRVRLDRNQFTGNITEAFGIHPELDFISISRNQFVGELSPQWGECVKLTRMEMDRNNLSGEIPPELGELKELHYLNLHSNELTGNIPPELGNLRLLYMFNLSRNHLAGDIPQSMGKLAQLESLDLSDNNFTSSIPVELGNCRKLLSLNLSQNNLSGEIPPELGNLFSLSYMLDLSSNSLSGRIPQNLQKLTILQFLNVSHNHLSGAIPQSFLNMVSLQSVDFSFNNLTGSIPTGSIFQKAQAGAYVGNSGLCGEAEGLTRCSPYKSEGLNKKVLLGVIMPVCVLSMMGIIAVGIVVSHRHVKLFDEEMRGTENIDKSKSIVWGRDGKFTLAEISKATDNFNDKYCIGKGGCGSVYRAELSRGLVVAVKRLHLTESSDTPVRNHQSFENEIAALTEVRHRNIIKLYGFCSNRGNMYLVYEHIDRGSLRKVLYGDEGSLELNWRTRVKIVQGIAHALAYLHSDCSPPIVHRDVTLNNILVDSEFEPRLADFGTAKLLSTNTTSWTSIAGSYGYMAPELAQTMRVTEKCDVFSFGVVALEIMMGKHPGDLLASLSSSSMMDSQMHLKDELDQRLRPPSGKLAKAVAFVVTIALACTRDTPDSRPTMRYVARELSANKLACFAEPFCMLTIAKLTGYQ 1219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02654 1219 ProSiteProfiles Leucine-rich repeat profile. 222 243 IPR001611 GO:0005515
Bva13g02654 1219 Pfam Leucine rich repeat 100 159 IPR001611 GO:0005515
Bva13g02654 1219 Pfam Leucine rich repeat 198 256 IPR001611 GO:0005515
Bva13g02654 1219 Gene3D Ribonuclease Inhibitor 29 190 IPR032675 -
Bva13g02654 1219 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 13 124 - -
Bva13g02654 1219 Pfam Protein kinase domain 927 1189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02654 1219 Gene3D Ribonuclease Inhibitor 480 850 IPR032675 -
Bva13g02654 1219 Gene3D Phosphorylase Kinase; domain 1 888 1005 - -
Bva13g02654 1219 SUPERFAMILY Outer arm dynein light chain 1 383 529 - -
Bva13g02654 1219 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 13 124 - -
Bva13g02654 1219 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 125 1213 - -
Bva13g02654 1219 SUPERFAMILY Protein kinase-like (PK-like) 911 1195 IPR011009 -
Bva13g02654 1219 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 125 1213 - -
Bva13g02654 1219 Pfam Leucine rich repeat N-terminal domain 31 71 IPR013210 -
Bva13g02654 1219 SMART LRR_typ_2 196 220 IPR003591 -
Bva13g02654 1219 SMART LRR_typ_2 654 678 IPR003591 -
Bva13g02654 1219 SMART LRR_typ_2 485 509 IPR003591 -
Bva13g02654 1219 SMART LRR_typ_2 775 798 IPR003591 -
Bva13g02654 1219 SMART LRR_typ_2 171 193 IPR003591 -
Bva13g02654 1219 SMART LRR_typ_2 799 824 IPR003591 -
Bva13g02654 1219 SMART LRR_typ_2 702 726 IPR003591 -
Bva13g02654 1219 SMART LRR_typ_2 221 243 IPR003591 -
Bva13g02654 1219 SMART LRR_typ_2 268 291 IPR003591 -
Bva13g02654 1219 SMART LRR_typ_2 437 461 IPR003591 -
Bva13g02654 1219 SMART LRR_typ_2 123 147 IPR003591 -
Bva13g02654 1219 SMART LRR_typ_2 316 340 IPR003591 -
Bva13g02654 1219 Gene3D Ribonuclease Inhibitor 191 479 IPR032675 -
Bva13g02654 1219 SUPERFAMILY L domain-like 48 402 - -
Bva13g02654 1219 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1051 1063 IPR008266 GO:0004672|GO:0006468
Bva13g02654 1219 SUPERFAMILY RNI-like 503 818 - -
Bva13g02654 1219 Gene3D Transferase(Phosphotransferase) domain 1 1006 1203 - -
Bva13g02654 1219 ProSiteProfiles Protein kinase domain profile. 925 1208 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02654 Bva-Chr13 19628393 19637377 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02654 32 672 Receptor kinase-like Gene Family AT4G08850 32.609 6.53e-82 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva13g02654 Pkinase 1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02654 - - gmx:100809137 1633.62