Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02653 ATGCTTTCGAAGGCAAAACCATCTCAGGTTGTAGTCATATGCTGGATCACAGCATCACCAAGAACAGAAGCAGAAGCTCTTGTCAAATGGAAAAACAGCCTACCTCAGcatcttccttcttctctcaATTCATGGTCCCCGACCAACGTCGGCAACCTCTGCAGCTGGGATGCCATTCTTTGTGATAGCAGTAACACAACAGTCTCAGAGATAAACCTCTCTGGTGCCAATCTCAATGGAACCCTCACTGGGTTGGAATTTTCTTCCGTTCCCAATCTCACTCGCCTCAACCTGAATACCAATAAGTTCAATGGGGCAATACCATCTGCAATTGGTAATCTCTCCAGGCTAACTTCCTTGGACCTGGGAAATAACCTATTTGGAGATATACTACCTTCCGAGCTAGGCCAGCTGAAGGAGCTTCAATATCTTGATCTGTACAACAACAATCTCATTGGTAACATCCCCTATCAGCTCACAAATCTCCCAAAACTATGGTACCTAGACCTCGGAGCAAACTATTTTACATCTCCTCCGGACTGGTCCCAATATTCAGCCATGTCTTCCTTAACCCACCTCAGTTTGGCTATCAACAGATTCAATTCTGACTTCCCTAGTTTTGTACTGGATTGCCAGAACTTGACATATCTTGACTTGTCTCAAAATCCTCTAAGCCTAATACCAGATTCACTATATACCAGTCTGGGAAAGCTTGAATTCCTGAATCTCACCAATTGTGGGCTAGATGGACCATTGCCATCAAACTTTTCCAAGCTTTCTAATCTGAAAGAATTCCGCCTGGGAGTTAACAAGTTTACTGGTGCCATTCCTGGATCCTTAGGATTGATATCAGGACTTCAGATCCTTGAATTGTATGAGAACGTACTCCATGGGGAAATTCCTGCCTCTTTAGGCCAACTCAGGCAGCTTTGGCGTCTTGATCTCCAAAAGAATCTTTTGAATTCTACTGTCCCTACTGAGCTTGGCTTTTGTACTAATCTGACATACTTGAGTTTGGCAGTAAATACTCTAACTGGTCCCTTGCCTTTGTCATTATCCAATCTCACCAAGATAGCAGAGTTGGGATTgtcagataatttttttacaggtcagatttcttcttcattgatCTCCAATTGGACTGAGTTGGTCTCTCTGCAACTTCAAAACAATACATTCACAGGTGAAATTCCTGAAGAGATCAGCctcttgaaaaaaataaactacctCTTTCTTTACAGAAATAACTTCTCTGGTCCCATTCCCGCAGGGATTGGAAAATTGAAAGCAATGTTAGAATTGGACCTTTCACTTAACCAATTGTCTGGTCCTCTTCCTTCAAGCATATGGAATCTTACAGACATTCGAGCCATAAATCTTTTCTTCAATAGTCTCTCTGGAACCATTCCCATGGATATTGGAAACTTGTCCTCACTAGAAATTTTTGATGTcgacaataattttttgcatGGAGAGTTGCCAGAGACCATATCCCAGTTAACTCATTTAATATCTTTGTCTGTATTCACTAATAATTTTTCGGGCAGGATTCCCAGAGCTTTTGGGAAGAATAGTCCGAATCTGGCTATTGTCCGCCTTTCAAACAACAGCTTCTCTGGAGAACTGCCGCCTGATTTGTGCAGCGGATTCGTACTTAAGGTTATAACGGTGAATAACAACAGCTTTTCTGGGCTACTGCCAAAGTGCTTGAGAAATTGTTCAGAGCTCACTAGAGTTCGGCTTGATAGAAATCAGTTCACTGGAAACATCACAGAAGCATTTGGGATTCACCCAGAACTTGATTTCATCTCAATCAGTGGCAATCAATTTGTTGGTGAGCTCTCTCCTCAGTGGGGTGAATGTGTGAACTTAACCAGAATGGAGATGGATGGAAACAATCTTTCTGGAAAAATTCCAACTGAGCTGGGTAAGttgaaaaatttacaatatctAAACCTGCAATTCAATGAACTCGCAGGCAATATCCCTCCTGAAATGGGAAATCTTAACCTGCTGTTTATGCTCAACTTGAGCAGAAACCATTTGGCAGCAGATATCCCAGAGAGTATCGGGAAATTAGCTCAGCTTGAATATCTTGACTTATCAGGTTCAATCCCAACTGGCAGTATTTTCCAAAAAGCACCAGCTGGTGCTTATGTCGGGAACTTGGGCTTGTGTGGGGAAGCAGAAGGTTTAACTCATTGCTATACAGACAAGTCAGAAGGTTTAAACAAAAAGGTTCTTCTTGGTGTTATTATACCAGTTTGTGTGCTATCAATGATAGGGATCATTGTCGGAATTCTAGCATTTCGCAGGCGGGTCAAACTTCTTGATGAAGAGATGACAAGAACGAAAAGCAATGACAAATCTATAAGCATGGTATGGGGAAGAGATGGAAAAATTACATTTGCAGAAATTATCAAGGCCACAGATAACTTCAACGACAAGTACTGCATTGGAAAAGGAGGATACGGATGCGTCTACAGAGCAGAATTATCCACAGGTCAAGTTTTTGCAGTAAAGAGGCTCAATTTGACAGATTTTAGTGACATCCCAATAAGAAACCGCCAGAGCTTTGAGAATGAGATTGGAGCTCTTACAGAAGTGAGGCACCGCAACATCATAAAGCTTTATGGGTTTTGTTCCAACAGGGGACACATGTACCTGGTATACGAACACATTGACAGAGGTAGTTTGAGAAAAGTGCTGTATGGGGATGAAGGGTCATTGGAGCTAAACTGGCGTTCAAGGGTGAAAATTGTGCAAGGAATAGCACATGCACTTGCTTACCTGCACAGTGACTGTTCCCCACCAATTGTGCACAGAGATGTGACATTGAACAACATATTAGTGGACTCAGAATTTGAACCTCGCCTTGCAGATTTTGGCACAGCAAAATTGCTCAGCACCAATATAACAAGCTGGACCTCAATTGCTGGGTCCTATGGCTACATGGCTCCAgAGCTGGCACAAACAATGAGGGTCACAGAAAAGTGCGATGTGTACAGCTTTGGGGTGGTGGCACTTGAGATAATGATGGGGAAGCACCCAGGGGATCTCTTGGCTTCTCTATCTTATTCGACGAAGGATTCGGAGATGCTTCTGGAGAATGAGCTAGACCAAAGGCTTCCAGCTCCAACGGAGGAATTAGCTGAAACAGTAGCTTTCGTAGTAACAATAGCTTTGGCATGCACTCGGGACACTCCAGATTCGAGACCCACCATGCTCTCTGTGTCACAAGAGCTATCCGCTAACAAACTGACTTGTTATTCTGAGCCCTTTGGCATGCGTACCATTGCCAAAGCTAATGGGGCATCcta 3320 0.4181 MLSKAKPSQVVVICWITASPRTEAEALVKWKNSLPQHLPSSLNSWSPTNVGNLCSWDAILCDSSNTTVSEINLSGANLNGTLTGLEFSSVPNLTRLNLNTNKFNGAIPSAIGNLSRLTSLDLGNNLFGDILPSELGQLKELQYLDLYNNNLIGNIPYQLTNLPKLWYLDLGANYFTSPPDWSQYSAMSSLTHLSLAINRFNSDFPSFVLDCQNLTYLDLSQNPLSLIPDSLYTSLGKLEFLNLTNCGLDGPLPSNFSKLSNLKEFRLGVNKFTGAIPGSLGLISGLQILELYENVLHGEIPASLGQLRQLWRLDLQKNLLNSTVPTELGFCTNLTYLSLAVNTLTGPLPLSLSNLTKIAELGLSDNFFTGQISSSLISNWTELVSLQLQNNTFTGEIPEEISLLKKINYLFLYRNNFSGPIPAGIGKLKAMLELDLSLNQLSGPLPSSIWNLTDIRAINLFFNSLSGTIPMDIGNLSSLEIFDVDNNFLHGELPETISQLTHLISLSVFTNNFSGRIPRAFGKNSPNLAIVRLSNNSFSGELPPDLCSGFVLKVITVNNNSFSGLLPKCLRNCSELTRVRLDRNQFTGNITEAFGIHPELDFISISGNQFVGELSPQWGECVNLTRMEMDGNNLSGKIPTELGKLKNLQYLNLQFNELAGNIPPEMGNLNLLFMLNLSRNHLAADIPESIGKLAQLEYLDLSGSIPTGSIFQKAPAGAYVGNLGLCGEAEGLTHCYTDKSEGLNKKVLLGVIIPVCVLSMIGIIVGILAFRRRVKLLDEEMTRTKSNDKSISMVWGRDGKITFAEIIKATDNFNDKYCIGKGGYGCVYRAELSTGQVFAVKRLNLTDFSDIPIRNRQSFENEIGALTEVRHRNIIKLYGFCSNRGHMYLVYEHIDRGSLRKVLYGDEGSLELNWRSRVKIVQGIAHALAYLHSDCSPPIVHRDVTLNNILVDSEFEPRLADFGTAKLLSTNITSWTSIAGSYGYMAPELAQTMRVTEKCDVYSFGVVALEIMMGKHPGDLLASLSYSTKDSEMLLENELDQRLPAPTEELAETVAFVVTIALACTRDTPDSRPTMLSVSQELSANKLTCYSEPFGMRTIAKANGAS 1106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02653 1106 ProSiteProfiles Protein kinase domain profile. 813 1095 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02653 1106 Gene3D Ribonuclease Inhibitor 457 743 IPR032675 -
Bva13g02653 1106 Pfam Leucine rich repeat N-terminal domain 22 62 IPR013210 -
Bva13g02653 1106 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 701 1099 - -
Bva13g02653 1106 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 12 115 - -
Bva13g02653 1106 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 116 315 - -
Bva13g02653 1106 ProSitePatterns Protein kinases ATP-binding region signature. 819 841 IPR017441 GO:0005524
Bva13g02653 1106 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 701 1099 - -
Bva13g02653 1106 Gene3D Phosphorylase Kinase; domain 1 775 893 - -
Bva13g02653 1106 Pfam Protein kinase domain 815 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02653 1106 ProSitePatterns Tyrosine protein kinases specific active-site signature. 939 951 IPR008266 GO:0004672|GO:0006468
Bva13g02653 1106 SUPERFAMILY Protein kinase-like (PK-like) 790 1082 IPR011009 -
Bva13g02653 1106 ProSiteProfiles Leucine-rich repeat profile. 213 234 IPR001611 GO:0005515
Bva13g02653 1106 Gene3D Ribonuclease Inhibitor 182 274 IPR032675 -
Bva13g02653 1106 Gene3D Ribonuclease Inhibitor 20 181 IPR032675 -
Bva13g02653 1106 SUPERFAMILY L domain-like 52 373 - -
Bva13g02653 1106 SUPERFAMILY L domain-like 363 711 - -
Bva13g02653 1106 Pfam Leucine rich repeat 91 151 IPR001611 GO:0005515
Bva13g02653 1106 Pfam Leucine rich repeat 189 248 IPR001611 GO:0005515
Bva13g02653 1106 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 12 115 - -
Bva13g02653 1106 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 227 702 - -
Bva13g02653 1106 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 116 315 - -
Bva13g02653 1106 Gene3D Ribonuclease Inhibitor 275 376 IPR032675 -
Bva13g02653 1106 SMART LRR_typ_2 669 693 IPR003591 -
Bva13g02653 1106 SMART LRR_typ_2 212 234 IPR003591 -
Bva13g02653 1106 SMART LRR_typ_2 645 668 IPR003591 -
Bva13g02653 1106 SMART LRR_typ_2 138 162 IPR003591 -
Bva13g02653 1106 SMART LRR_typ_2 187 211 IPR003591 -
Bva13g02653 1106 SMART LRR_typ_2 428 452 IPR003591 -
Bva13g02653 1106 SMART LRR_typ_2 307 331 IPR003591 -
Bva13g02653 1106 SMART LRR_typ_2 476 500 IPR003591 -
Bva13g02653 1106 SMART LRR_typ_2 90 113 IPR003591 -
Bva13g02653 1106 SMART LRR_typ_2 114 137 IPR003591 -
Bva13g02653 1106 Gene3D Ribonuclease Inhibitor 377 456 IPR032675 -
Bva13g02653 1106 Gene3D Transferase(Phosphotransferase) domain 1 894 1092 - -
Bva13g02653 1106 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 227 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02653 Bva-Chr13 19627762 19631739 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02653 234 987 Receptor kinase-like Gene Family AT4G08850 37.500 1.78e-178 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva13g02653 Pkinase 3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02653 - - vvi:100246300 1194.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02653 13 19627762 19631739 Bva13g02653 13 19627762 19631739 ECH