Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02652 ATGGCAACCATTCATATGGCTTCTGTTTATCTCTGTCATATTCTCTTGCTtcccttctttcttcctctgcAGATCACAGCATCACCAAGAACAGAAGCAGAAGCTCTTGTCAAATGGAAAAACAGCCTACCTCGgcctcttccttcttctctcaATTCATGGTCCCCGACCAACGTCGGCAACCTCTGCAGCTGGGATGCCATTCTTTGTGATAGCAGTAACACAACAGTCTCAGAGATAAACCTCTCTGGTGCCAATCTCAATGGAACCCTCACCGGGTTGGAATTTTCTTCCGTTCCCAATCTCACTCGCCTCAACCTGAATACCAACAATTTCAACGGGGCAATACCATCTGCAATTGGTAATCTCTCCAGGCTAACTTCCTTGGACCTGGGAAATAACCTATTTGGAGATATACTACCTTCCGAGCTAGGCCTGCTGAAGGAGCTTCAATATCTTGATCTGTACAACAACAATCTGACTGGTAACATCCCCTATCAGCTCACAAATCTCCCAAAACTAGGATACCTAGACCTTGGAGCAAACTATTTTACATCTCCTCTGGACTGGTCCCAATATTCAGCCATGTCTTCCCTAACCCACCTCAGTTTGGCTATCAACAGTTTCAATTCTGACTTCCCTAGTTTTGTACTGGATTGCCAGAACTTGACATATCTTGACTTGTCTCAAAATCCTCTAAGCCTAATACCAGATTCATTGTATATCAGTCTGGGAAAGCTTGAATTCCTGAATCTCACCAATTGTGGGCTAGATGGACCATTGCCATCAAACTTTTCCAAGCTTTCTAATCTGAAAGAACTCCGCCTGGGAGTTAACAAGTTTACTGGTGCCATTCCTGCATCCTTAGGATTGATATCAGGACTTCAGATCCTTGAATTGAATGAGAACGTACTCCATGGGGAAATTCCTGCCTCTTTAGGCCAACTCAGGCAGCTTTGGCGTCTTGATCtccaaaagaattttttgaattctaCTGTCCCTACTGAGCTTGGCTTTTGTACTAACCTGACCTACTTGAGTTTGGCAGTAAATACTCTGACTGGTCCCCTGCCTTTGTCATTATCCAATCTGACCAAGATAACAGACTTGGGGTTGTCAGATAATGTTTTTACAGGTcagatttcttcttcattgatCTCCAATTGGACTGAGTTGGTCTCTCTGCAACTTCAAAACAATACATTCACAGGTGAAATTCCTGAAGAGATCGGACTcttgacaaaaataaacatcCTCTATCTGTACAGCAATCACTTCTCTCGTCCTATTCCAGCGGGGATTGGAAACTTGAAAGCTATGATAGAATTAGACATTTCAGGAAACCAATTATCTGGTCCTCTTCCTTCAAGCATATGGAATCTTACAAACATTCAAGTCATAAATCTTTTCTTCAATAATCTCTCTGGAACCATTCCCATGGATATTGGAAACTTGTCCTCTCTACAAATTTTTGATGTCAACACTAATTTTTTGCAAGGAGAGTTACCAGAAACCATATCTCAGCTAACTCAGCTAATATCAATTTCTGTTTTCAGTAATAATTTTTCGGGCAGCATTCCCAGAGATTTTGGGAAGAATAGTCCGAAGCTGGCTCGTGTCAGCTTTTCAAACAACAGCTTCTCTGGAGAACTGCCGCCTGATTTGTGCAGCGGATTCGTACTCGAGGTTATAACAGTGAATAACAACAGCTTTTCTGGGCTACTGCCAAAGTGCTTGAGAAATTGTTCAAAGCTAACTAGAGTTCGGCTTGACAGAAATCAGTTCACTGGAAACATCACAGAAGCATTTGGGATTCACCCAGAACTTGATTTCATCTCAATCAGTGGCAATCAGTTTGTTGGTGAGCTCTCTCCTCAGTGGGCTGAATGCGTAAACTTAACCAGAATGGAGATGGATAGAAACAATCTTTCTGGAAAAATTCCACCTGAGCTGGGTAAGttgaaaaatttacaatatctAAACCTGCAATTCAATGAACTCGCAGGCAATATCCCTCCTGAAATGGGAAATCTTGGCCTGCTGTTTATGCTCAACTTGAGCAGAAACCATTTGGCAGCAGATATCCCACAGAGTATCGGGAAATTAGCTCAGCTTGAATATCTTGACTTATCAGGTAACAATTTCACCAGAAGCATACCAGTAGAACTCGGTAATTGTCGCAAATTACTGAGCTTGAATTTGAGTCACAACAATCTATCTGGTGATATACCCTCAGAACTTGGCAATCTGTTCTCACTAAGCTACTTGTTGGATCTCAGTAGCAACTCTTTTTCAGGGCAAATTCCTCAAAACCTTCAAAAGCTTACTTCTTTGCAGATCCTCAATGTGTCACATAACCATCTTTCAGGAGCAATCCCAGAATCGTTTTCAGACATGCTCAGTCTTCAGTCTGTTGATTTTTCCTACAACAACTTGACAGGTTCAATCCCAACTGGCAGTATTTTCCAAAAAGCACCAGCTGGTGCTTATGTCGGGAACTCGGGCTTGTGTGGGAAAGCAGAAGGTTTAATTCGTTGTTCTACAGCATCTTCTTCAGACAAGTCAGAAGGGTTAAACAAAAAGGTTCTTCTTGGTGTTATTATTCCAGTTTGTGTGCTATCAATAATAGGGATAATAGTTGTCGGAATTATAATATTCCGCAGGCAGGTCAAACTTCTTGACGAAGAGATGAGAAGTGCTGAAAGCAATGACAAATCTACAAGCGTGGTATGGGCAAGAGATGGAAAATTCACATTTGCAGAAATTATCAAGGCCACAGATAACTTCAACGATAAGTACTGCATTGGAAAAGGAGGATTCGGAAGCGTCTACAGAGCAGAATTTTCCACAGGTCTAGTTGTTGCAGTAAAGAGGCTCAATTTGACAGATTCTAGTGACATCCCAGTAACAAATCGCCAGAGCTTTGAGAATGAGATTAGAACTCTTACAGAAGTGAGGCACCGCAACATCATAAAGCTTTATGGGTTTTGCTCCAAGAGGGGACGCATGTACCTGGTTTATGAACACATTGAAAGAGGTAGTTTAAGAAAAGTGTTGTATGGGGATGAAGGGTCATTGGAGCTAAACTGGCTTTCAAGGGTGAAAATTGTGCAAGGAATAGCACATGCACTTGCCTACTTGCACAGTGACTGTTCCCCACCAATTGTTCACAGAGATGTGACATTGAATAACATACTATTGGATTCAGAATTTGAACCTCGCCTGGCAGATTTTGGCACCGCGAAGTTGCTCAGCGCCAATACAACAAGCTGGAGCTCAATTGCTGGGTCCTATGGCTACATGGCTCCAGAGCTAGCACAAACCATGCGGGTCACAGAAAAGTGCGATGTGTACAGCTTTGGGGTAGTGGCATTGGAGATAATGATGGGGAAGCACCCAGGGGATCTATTGACTTCTCTGTCGAAGGATTCGCAGATGCTTCTGAAGGAGGAGCTAGACCAAAGGCTTCCACCTCCAACTGGGGAATTAGCTGAAGTAGTAGTGTTCGTAGTAACAATAGCTTTGGCATGCACGCGTAACAATCCAGAGTCGAGACCCACCATGCGTGCTGTGGCACAAGAGCTATCGGCTAACACACAAGCTTGTCTCTCGGAGCCCTTTGGCACGCTTACCATCACCAAGCTCAACGGGTTTCAGAAATA 3662 0.4186 MATIHMASVYLCHILLLPFFLPLQITASPRTEAEALVKWKNSLPRPLPSSLNSWSPTNVGNLCSWDAILCDSSNTTVSEINLSGANLNGTLTGLEFSSVPNLTRLNLNTNNFNGAIPSAIGNLSRLTSLDLGNNLFGDILPSELGLLKELQYLDLYNNNLTGNIPYQLTNLPKLGYLDLGANYFTSPLDWSQYSAMSSLTHLSLAINSFNSDFPSFVLDCQNLTYLDLSQNPLSLIPDSLYISLGKLEFLNLTNCGLDGPLPSNFSKLSNLKELRLGVNKFTGAIPASLGLISGLQILELNENVLHGEIPASLGQLRQLWRLDLQKNFLNSTVPTELGFCTNLTYLSLAVNTLTGPLPLSLSNLTKITDLGLSDNVFTGQISSSLISNWTELVSLQLQNNTFTGEIPEEIGLLTKINILYLYSNHFSRPIPAGIGNLKAMIELDISGNQLSGPLPSSIWNLTNIQVINLFFNNLSGTIPMDIGNLSSLQIFDVNTNFLQGELPETISQLTQLISISVFSNNFSGSIPRDFGKNSPKLARVSFSNNSFSGELPPDLCSGFVLEVITVNNNSFSGLLPKCLRNCSKLTRVRLDRNQFTGNITEAFGIHPELDFISISGNQFVGELSPQWAECVNLTRMEMDRNNLSGKIPPELGKLKNLQYLNLQFNELAGNIPPEMGNLGLLFMLNLSRNHLAADIPQSIGKLAQLEYLDLSGNNFTRSIPVELGNCRKLLSLNLSHNNLSGDIPSELGNLFSLSYLLDLSSNSFSGQIPQNLQKLTSLQILNVSHNHLSGAIPESFSDMLSLQSVDFSYNNLTGSIPTGSIFQKAPAGAYVGNSGLCGKAEGLIRCSTASSSDKSEGLNKKVLLGVIIPVCVLSIIGIIVVGIIIFRRQVKLLDEEMRSAESNDKSTSVVWARDGKFTFAEIIKATDNFNDKYCIGKGGFGSVYRAEFSTGLVVAVKRLNLTDSSDIPVTNRQSFENEIRTLTEVRHRNIIKLYGFCSKRGRMYLVYEHIERGSLRKVLYGDEGSLELNWLSRVKIVQGIAHALAYLHSDCSPPIVHRDVTLNNILLDSEFEPRLADFGTAKLLSANTTSWSSIAGSYGYMAPELAQTMRVTEKCDVYSFGVVALEIMMGKHPGDLLTSLSKDSQMLLKEELDQRLPPPTGELAEVVVFVVTIALACTRNNPESRPTMRAVAQELSANTQACLSEPFGTLTITKLNGFQK 1220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02652 1220 Gene3D Transferase(Phosphotransferase) domain 1 1010 1205 - -
Bva13g02652 1220 ProSitePatterns Protein kinases ATP-binding region signature. 935 957 IPR017441 GO:0005524
Bva13g02652 1220 Pfam Leucine Rich Repeat 777 797 IPR001611 GO:0005515
Bva13g02652 1220 Pfam Leucine Rich Repeat 222 240 IPR001611 GO:0005515
Bva13g02652 1220 Pfam Leucine Rich Repeat 246 268 IPR001611 GO:0005515
Bva13g02652 1220 SMART LRR_sd22_2 147 173 - -
Bva13g02652 1220 SMART LRR_sd22_2 437 463 - -
Bva13g02652 1220 SMART LRR_sd22_2 220 240 - -
Bva13g02652 1220 SMART LRR_sd22_2 702 723 - -
Bva13g02652 1220 SMART LRR_sd22_2 340 366 - -
Bva13g02652 1220 Gene3D Phosphorylase Kinase; domain 1 891 1009 - -
Bva13g02652 1220 Pfam Protein tyrosine and serine/threonine kinase 935 1195 IPR001245 GO:0004672|GO:0006468
Bva13g02652 1220 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 10 1214 - -
Bva13g02652 1220 SUPERFAMILY RNI-like 520 815 - -
Bva13g02652 1220 ProSiteProfiles Protein kinase domain profile. 929 1208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02652 1220 Pfam Leucine rich repeat N-terminal domain 31 71 IPR013210 -
Bva13g02652 1220 SUPERFAMILY RNI-like 285 619 - -
Bva13g02652 1220 SMART LRR_typ_2 654 678 IPR003591 -
Bva13g02652 1220 SMART LRR_typ_2 775 798 IPR003591 -
Bva13g02652 1220 SMART LRR_typ_2 268 291 IPR003591 -
Bva13g02652 1220 SMART LRR_typ_2 799 824 IPR003591 -
Bva13g02652 1220 SMART LRR_typ_2 413 437 IPR003591 -
Bva13g02652 1220 SMART LRR_typ_2 221 243 IPR003591 -
Bva13g02652 1220 SMART LRR_typ_2 196 220 IPR003591 -
Bva13g02652 1220 SMART LRR_typ_2 485 509 IPR003591 -
Bva13g02652 1220 SMART LRR_typ_2 702 726 IPR003591 -
Bva13g02652 1220 SMART LRR_typ_2 147 171 IPR003591 -
Bva13g02652 1220 SMART LRR_typ_2 316 340 IPR003591 -
Bva13g02652 1220 SMART LRR_typ_2 99 122 IPR003591 -
Bva13g02652 1220 SMART LRR_typ_2 123 146 IPR003591 -
Bva13g02652 1220 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 10 1214 - -
Bva13g02652 1220 CDD STKc_IRAK 935 1195 - -
Bva13g02652 1220 Gene3D Ribonuclease Inhibitor 29 192 IPR032675 -
Bva13g02652 1220 ProSiteProfiles Leucine-rich repeat profile. 222 243 IPR001611 GO:0005515
Bva13g02652 1220 SUPERFAMILY L domain-like 61 381 - -
Bva13g02652 1220 SUPERFAMILY Protein kinase-like (PK-like) 911 1195 IPR011009 -
Bva13g02652 1220 Gene3D Ribonuclease Inhibitor 193 381 IPR032675 -
Bva13g02652 1220 Gene3D Ribonuclease Inhibitor 536 855 IPR032675 -
Bva13g02652 1220 ProSiteProfiles Leucine-rich repeat profile. 728 750 IPR001611 GO:0005515
Bva13g02652 1220 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1055 1067 IPR008266 GO:0004672|GO:0006468
Bva13g02652 1220 Pfam Leucine rich repeat 683 739 IPR001611 GO:0005515
Bva13g02652 1220 Pfam Leucine rich repeat 100 160 IPR001611 GO:0005515
Bva13g02652 1220 Gene3D Ribonuclease Inhibitor 382 535 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02652 Bva-Chr13 19621334 19625413 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02652 32 672 Receptor kinase-like Gene Family AT4G08850 32.453 3.60e-83 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva13g02652 PK_Tyr_Ser-Thr 6.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02652 - - gmx:100809137 1670.98