Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02649 ATGAGGGTCACAGAAAAGTGCGATGTGTACAGCTTTGGGGTGGTGGCACTTGAGATAATGATGGGGAAGCACCCAGGGGATCTCTTGGCTTCTCTATCATCTTCTTTAATGATGGATTTGCAGATGCTTCTGAAGGATGAGATAGACCAAAGGCTTCGACCTCCGAGTGGGGAATTAGCTAAAGCAGTAGCGCTCGTAGTAACCATAGCTTTGGCATGCACGCGTAACGCTCCAGACTCGAGACCCACCATGCGTTATGTGGCACAGGAGCTATCGGCTAACAAACTGGCTTGTTTTTCTGAGCCCTTCGGCATGCTTACCCTTACCAAGCTCGCCGGGTTTCAGAAATA 350 0.4971 MRVTEKCDVYSFGVVALEIMMGKHPGDLLASLSSSLMMDLQMLLKDEIDQRLRPPSGELAKAVALVVTIALACTRNAPDSRPTMRYVAQELSANKLACFSEPFGMLTLTKLAGFQK 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02649 116 SUPERFAMILY Protein kinase-like (PK-like) 2 94 IPR011009 -
Bva13g02649 116 PANTHER TYROSINE KINASE FAMILY PROTEIN 1 95 - -
Bva13g02649 116 PANTHER LEUCINE RICH REPEAT KINASE 2 1 95 - -
Bva13g02649 116 Gene3D Transferase(Phosphotransferase) domain 1 1 94 - -
Bva13g02649 116 Pfam Protein tyrosine and serine/threonine kinase 2 91 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02649 Bva-Chr13 19618863 19619213 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02649 1 92 Receptor kinase-like Gene Family AT1G25320 31.633 5.29e-12 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva13g02649 PK_Tyr_Ser-Thr 4e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02649 - - gmx:100809137 150.984