Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02648 ATGGCCTCAAACATCATGGGTAGCTCAATCGCTGGTTCTCACTCCAGAAATGAACTCCATTTTTGCCATGATTCTAATGAGGAAAACGGAGGAGACTACAATGAACGGCAGTGGCATTCCAGTGATCGAGCTTTCTCCTCGTCAGGAAGTGTTGCTGGTAAAGATTTTGAAGGGGGTAAAGAATTCAACGCAAACACTGAATGGACAgaaagggaagagaaatgGGAATTAAATCGAGAAAATAGAGGTGACGCAAAAGTTGATAAAGTTGGAGAAGATGAGTACCTTTTGTCTGAAGCCAGGCAACCATTGTGGCGTATAGTCCCAATACCTTCAAGCCTAATAAACCCATATCGCATCGTCATCGTCCTGCGCCTCatcattctaattttctttatccatTTCCGCATCTTAACTCCAGTAAATGATGCACTAGCATTATGGCTTCTCTCTGTAATATGCGAAATCTGGTTTTCTCTGTTCTGGGTACTTGAACAATTCCCCAAATGGTTCCCCATCATTCACGAGACCTACCTGGATCGCCTCTCAATAAGGTTTGAGCGAGAAGGGGAGCCAAACCTTCTAGCCCCAGTTGATGTCTTTGTCAGCACTGCGGACCCTCTGAAGGAACCACCTATTACAACAGCAAATGCGGTTCTTTCAGTATTGTCTGTTGATTACCCTGTTGAGAAGATCAACTGCTATGTATCAGATGACAGTGCCTCTTTGCTTCTTTTTGATACGCTATCAGAAACTTCTGAATTTGCCAGACAATGGGTTCCTTTTTGTAAGAAGTATAACATTGAACCCAGGGCTCCTGAGTTCTACTTCTCTCAGAAAGTTGATCCCTTGAAAGATATGGTGCAGCCCACATTTGTAAAGGAACGCAGATCCATGAAGAGAGAGTATGAAGAATTCAAAGTGAAACTTAATGCCTTGGTAGCTAAGGCTCAGAAGAAACCACAAGAGGGATGGATCATGCAGGATGGTACCCCATGGCCTGGGAATAACACTAATGATCATCCAGGAATGATTCAGATTTACTTGGGAAGTGCAGGTGCTCTGGATGTGGAAAGTGAGCAACTGCCTCGACTTGTTTATGTTTCACGTGAAAAACGTCCTGGCTACCAAGACCACACGAAAGCTGGTGCCATGAATGCTCTGGTTCGAGTTTCTGCCGTGCTTACAAATGCACCTTTTGTGATGAATATTGATTGTGACCACTACATCAACAATAGCAAGGCCATAAGGGAGGCCATGTGCTTCTTCATGGACTCCCAGCTGAGGAAAGAGCTTGGTTTTGTCCAATTTCCACAAAGATTCGATGGTATTGTTGGCAACGATCGATATGCTACTCACGATGTTGTCTTCTATGATATCAACATGAAAGGCCTTAATGGGATTCAAGGTCCAGTATATGTTGGTACTGGATGTGTGTTTAACAGGCAAGCATTATATGGCTATGATCTACAAGTATGTAACGAAGGGCCAAGGATGACCAGGGGTGATTCAGAAAACTCCATGTCAGAAAAGAAATCAGCAAGAGGTTTCTTTAGTGGATTGCACACcagcaagaagaaaaagatggaaAAGGGGTCAAGGTCCAAATTTGATCATCAAGAGATTGAAGAAGAGCTTGAAGAGTATGATGATCTTGAGAAATCGTCGCTCATATCTGATAAGTCTTTTGTGAAGCAGTTTGGGCAGTCTCCATTATTCATTGCTTCCACTTTAATGGAAGATGGTGGACTTCTAGAAGGCGTCAATACCCAATTACTGATTAAGGAGGCCATTCATGTCATTAACTGTGGCTATGAACAGAAAACCAAATGGGGCAAGGAGattGGGTGGATATATGGCTCTGTCACTGAAGATATCTTGACAGGGTTTAAGATGCATTGCAGAGGATGGAAGTCAATCTACTGCATGCCAAAGAGGGCAGCTTTTAAGGGATATGCTCCAAGAAATCTAGCAGATCGGTTACACCAACTTCTGAAACGAGCTCTTGGTTCTACTGAGATTTTGCTTAGTGGCAATTGCCCACTGTGGTATGGCTATTCAGGAAACTTGAAGTGGCTAGAGAGGCTAGCTTACACTAACACTATAATTTCCCCATTCACTTCCATCCCTCTAGTGGCATACTGCGCAATTCCTGCTGTCTGTCTTCTGACTGGAAAGTTCATCATCCCCATTGTTTCAAACGTTGCTAGCATTTTGCTTATGGCTCTCCTTATCTCCATCATTCTAACCAGTATATTAGAGCTTAGATGGAGTGGGGTTGGCATTCAGGATTGGTGGCGCTACGAGCAAATCTGGGTCATCGGAGGCGTCTCTTCACATCTTTTTGCTGTATTTCTAGGCCTCATTAAACTTGTTGCTGGATTAGACAGCAATCAAGCTATCATGGCAAATGCAGCAGACAACAATGAATTGGGACAGTTCAAGTGGACTACTATTCTAATCCCACCAACCACTCTTGTAATCCTGAATATAGTGGGAATTGTGGCTGGAATCTCTGATGCCATTAACAATGGCTATGCCTCATGGGGGCCATTCTTTGGGAAGCTTTTTCTGGCCATCTGGGTCATCATGCACCTACATCCTTTCCTCAAAGGTCTAATGGAAAAGGGAAAGCAAAACAGGACACCTACTATCATAGTCCTCTGGTCAATACTTCTAGCATCAGTTTTCTCATTGATTTGGATCCGGATTGATCCTTTCTTGCCCAAGCAAATTGGTCCTATACTCAAACAATGCGGGGTGCAATGCTA 2771 0.4269 MASNIMGSSIAGSHSRNELHFCHDSNEENGGDYNERQWHSSDRAFSSSGSVAGKDFEGGKEFNANTEWTEREEKWELNRENRGDAKVDKVGEDEYLLSEARQPLWRIVPIPSSLINPYRIVIVLRLIILIFFIHFRILTPVNDALALWLLSVICEIWFSLFWVLEQFPKWFPIIHETYLDRLSIRFEREGEPNLLAPVDVFVSTADPLKEPPITTANAVLSVLSVDYPVEKINCYVSDDSASLLLFDTLSETSEFARQWVPFCKKYNIEPRAPEFYFSQKVDPLKDMVQPTFVKERRSMKREYEEFKVKLNALVAKAQKKPQEGWIMQDGTPWPGNNTNDHPGMIQIYLGSAGALDVESEQLPRLVYVSREKRPGYQDHTKAGAMNALVRVSAVLTNAPFVMNIDCDHYINNSKAIREAMCFFMDSQLRKELGFVQFPQRFDGIVGNDRYATHDVVFYDINMKGLNGIQGPVYVGTGCVFNRQALYGYDLQVCNEGPRMTRGDSENSMSEKKSARGFFSGLHTSKKKKMEKGSRSKFDHQEIEEELEEYDDLEKSSLISDKSFVKQFGQSPLFIASTLMEDGGLLEGVNTQLLIKEAIHVINCGYEQKTKWGKEIGWIYGSVTEDILTGFKMHCRGWKSIYCMPKRAAFKGYAPRNLADRLHQLLKRALGSTEILLSGNCPLWYGYSGNLKWLERLAYTNTIISPFTSIPLVAYCAIPAVCLLTGKFIIPIVSNVASILLMALLISIILTSILELRWSGVGIQDWWRYEQIWVIGGVSSHLFAVFLGLIKLVAGLDSNQAIMANAADNNELGQFKWTTILIPPTTLVILNIVGIVAGISDAINNGYASWGPFFGKLFLAIWVIMHLHPFLKGLMEKGKQNRTPTIIVLWSILLASVFSLIWIRIDPFLPKQIGPILKQCGVQC 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02648 923 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 3 [UDP-FORMING]-RELATED 62 923 - -
Bva13g02648 923 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 62 923 - -
Bva13g02648 923 Pfam Cellulose synthase 198 914 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bva13g02648 923 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 310 491 IPR029044 -
Bva13g02648 923 Coils Coil 296 316 - -
Bva13g02648 923 MobiDBLite consensus disorder prediction 44 63 - -
Bva13g02648 923 SUPERFAMILY Nucleotide-diphospho-sugar transferases 212 739 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02648 Bva-Chr13 19613492 19617547 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02648 61 923 Cell Wall Biosynthesis AT5G17420 63.899 0.0 1169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02648 K10999 - gmx:100781996 1364.36