Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02641 ATGGCACCCAATCCAAGAGTGACAAGTGCCTATCGGGCAATGAAAGTTCTTGGTATTGAggaagtaaaagtaaaaccaGTGTTAAAGAAACTTCTTAAATTGTATGATAAAAACTGGGAACTAATTGAAGCAGAGAACTATAGAGTTCTGGCAGATAGTATATTtcaggaggaagaagaaaatcagGGAGAGAgatggggaaaaaagaaacttgatGAAGAAGATATGGAGGAGGATGAAGAAGCTCATATGCATGATGAGCCTGTTCGACCGTTAAAGAGGCTACGTCTAAGAGGCAGAGAGAGTCAGGCTTCACAGCCTATGGCTGGCTGTGGCCCCAGATCTCCATTTCCCTCTCAAATGATAAAACCGAAAAATGAAGAGGGCTCTTTGCCTGAAAGCTCTTCAAGACAGCAGCCTCAGAACAAAGAGGTGTCATCTCCATCTGATATGGGACATGGGAGGATTGAAGTGAGGCCTCTTCCTTCACGAGACAGAACCACTGACAAGGGAAAGCAACCTGTATCACCTCAGGTTGCCATGAGagggaaaaatattatatctgaAAGAGTGCTACCATCTATCCCCAGTAAAGAACCAACAGGTGAACGAGGCACAGGCCTGTTGCTGCCTCATACTCACACTTTGATCATCCCCAAGGATGAGCCTATTGATGAATTGCCTGTTGATGAGGTTCCCATTGCAGTGATTCATCCTGATTCATTCTCTGGTAGAGATTCTCCAATTAAGAATGGTACTGCTGGAAAACATGATGGTCATGAAGCCTTGGCATCAAAATACAGAGGTAGTGAAGTTAGAGGTAAAGATATTGTTCCCTCATCACATGAAGAGGAAGCAAATGGCGAGGTTGCAACTCTATCACAGGAATGCCGTTCTGATGTAGAGATAGCCTCCTCATCATTAGGAGAGGAAATATCTGGAAAGATAACACCAAGGCTGAAGGAATCTAGTGCTCATGATGGATTGAGTGTTAGGGGCAATGTGGACATGCGTTCTTGTAGCTCAAATGGCTCAATTAATACTGATGCTGGACATATTGGCAAGGTCAGAAGAAATGATTTTCCAGGAAGTGATAACAAAAAAGGGCTGAGTGATCCCAAATCTCCAAACTCTGGTAGTTTGGTGGTTTCTACACAGCATCAGCTTACTCAAGATGATTTAAGGTCTATTCATGATTGCAAGGACATTACTAAAGGAGAAGAATATGTCAGTATTGCATGGGTAAATGAAAATACTAATGATTTCCCACCGCCTTTTCACTATATACCCCACAACCTGGTATTCCATGAAGCTTACGTtagattctctctttctcaaaTTGGGGTCAAGGATTGTTGTTCATCTTGTTTGGGCAGCTGTCTCTTGTCATCTACACCTTGTGCTTGTGCAAATAAAACTGGGGGTGGATTTGCTTACACAGCAGAAGGTACTGTGAAGGAAGCGTTCTTGGAAGAGTGCATTGCTATTAGTCGCAAACGTCAAGTACATAATTTCTATTGTAAAGACTGTCCACTTGAGAGATCAAGAAATGATGGTTTTGTAGAACCGTGTAAAGGACACATAAAGAGGAAGTTTATCAAAGAATGCTGGAGCAAATGTGGCTGTGGGAAACAATGTGGCAATCGAGTTGTCCAGAGAGGAATAACTTCTAAATTGCAGGTATTTTTCACCCCAGAAGGGAAAGGATGGGGTCTTCGTACCTTAGAGGACCTTCCAAAAGGGGATGTGAAGGATAAAGAAGCTCTTTGCTTGGATGCAGCATCCTATGGGAATGTTGCTAGGTTCATTAATCACAGGTGTTTGGATGCAAACTTAATTGAGATTCCAGTTGAAGTGGATGCCCCTGATCGCCACTACTATCATCTTGCCTTATTCACATCCAGAGAAATAGCAGCACAGGAAGAGCTCACTTGGGATTATGGCATCGACTTTGATGACCAGGATCATCCTATTAAGCCGTTCTTGTGCACATGTGGCAGTAAATTCTGCAGGAAGATGTCCCGATCAAACAGGTCCATTAGATCATCCTCAACTACTCTATG 2063 0.4111 MAPNPRVTSAYRAMKVLGIEEVKVKPVLKKLLKLYDKNWELIEAENYRVLADSIFQEEEENQGERWGKKKLDEEDMEEDEEAHMHDEPVRPLKRLRLRGRESQASQPMAGCGPRSPFPSQMIKPKNEEGSLPESSSRQQPQNKEVSSPSDMGHGRIEVRPLPSRDRTTDKGKQPVSPQVAMRGKNIISERVLPSIPSKEPTGERGTGLLLPHTHTLIIPKDEPIDELPVDEVPIAVIHPDSFSGRDSPIKNGTAGKHDGHEALASKYRGSEVRGKDIVPSSHEEEANGEVATLSQECRSDVEIASSSLGEEISGKITPRLKESSAHDGLSVRGNVDMRSCSSNGSINTDAGHIGKVRRNDFPGSDNKKGLSDPKSPNSGSLVVSTQHQLTQDDLRSIHDCKDITKGEEYVSIAWVNENTNDFPPPFHYIPHNLVFHEAYVRFSLSQIGVKDCCSSCLGSCLLSSTPCACANKTGGGFAYTAEGTVKEAFLEECIAISRKRQVHNFYCKDCPLERSRNDGFVEPCKGHIKRKFIKECWSKCGCGKQCGNRVVQRGITSKLQVFFTPEGKGWGLRTLEDLPKGDVKDKEALCLDAASYGNVARFINHRCLDANLIEIPVEVDAPDRHYYHLALFTSREIAAQEELTWDYGIDFDDQDHPIKPFLCTCGSKFCRKMSRSNRSIRSSSTTL 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02641 687 MobiDBLite consensus disorder prediction 58 73 - -
Bva13g02641 687 MobiDBLite consensus disorder prediction 157 171 - -
Bva13g02641 687 Gene3D - 1 60 IPR043017 -
Bva13g02641 687 MobiDBLite consensus disorder prediction 238 259 - -
Bva13g02641 687 SUPERFAMILY SET domain 411 672 IPR046341 -
Bva13g02641 687 SMART set_7 557 654 IPR001214 GO:0005515
Bva13g02641 687 MobiDBLite consensus disorder prediction 335 349 - -
Bva13g02641 687 Pfam SET domain 590 648 IPR001214 GO:0005515
Bva13g02641 687 ProSiteProfiles Pre-SET domain profile. 452 554 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Bva13g02641 687 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 581 - -
Bva13g02641 687 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 581 685 - -
Bva13g02641 687 MobiDBLite consensus disorder prediction 83 100 - -
Bva13g02641 687 MobiDBLite consensus disorder prediction 321 387 - -
Bva13g02641 687 MobiDBLite consensus disorder prediction 129 148 - -
Bva13g02641 687 Gene3D SET domain 583 673 IPR046341 -
Bva13g02641 687 Gene3D SET domain 381 582 IPR046341 -
Bva13g02641 687 ProSiteProfiles SET domain profile. 557 648 IPR001214 GO:0005515
Bva13g02641 687 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR2-LIKE PROTEIN 1 581 - -
Bva13g02641 687 Pfam Pre-SET motif 403 549 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Bva13g02641 687 MobiDBLite consensus disorder prediction 370 387 - -
Bva13g02641 687 MobiDBLite consensus disorder prediction 58 183 - -
Bva13g02641 687 Pfam Ubiquitin-binding WIYLD domain 6 60 IPR018848 GO:0018024
Bva13g02641 687 MobiDBLite consensus disorder prediction 353 367 - -
Bva13g02641 687 SMART preset_2 400 541 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Bva13g02641 687 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR2-LIKE PROTEIN 581 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02641 Bva-Chr13 19583357 19590977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02641 402 671 Su(var)3-9 homologs AT1G73100 27.052 2.21e-19 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bva13g02641 Pre-SET 3.3e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02641 - - gmx:100788602 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02641 13 19583357 19590977 Bva04g02740 04 23828416 23833602 BWGD
Bva13g02641 13 19583357 19590977 Bva13g02641 13 19583357 19590977 ECH