Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02629 ATGCAGGGTTCAGGTGACGGCGTCGGAGCATTTTCCGGTGATTCTAATATGTCATCTGTGTCTAAAGATCATAACTTGGTCCTCTCTTCGGAGGACTCTTCATCCCCGGATGAGTCTCACCTTGAATTGGGTCTTGGATTAAGCCTTTCTCGTCCTTGTGCGAAGCCTCACCCAGCTTCAACAACTCAATATGCAAGAATTTTGACGGCCGAGGATTTTCCTTCTGCAGTTTCTCCTACTTCTGCGTCTTCAACATCCTCCTCGTCTTCATCTTCCACTCCTTCGTCGTTGAGTAGGGCTAACGTCACAGCTGGTGCGAAGAGAACTGCTGATTCCGTTGTCGCCAATAACGGTCCCAGTCAGGTTGTAGGATGGCCTCCCCTTGGAGCATATAGAATGAATAGCTTCAACAACCATGGAAAATCACCTGCTACTGAAGCATTCAACTCAATGGTTGAGAAGAGTAAGAGGAATAATGCTGCAGTGAGGAACATTACTGACAATGGCAGTGAGAAAACCATTAGTACCAAAGATAAAGGACACCCTAGGAGTTCCCTGTTTGTGAAAGTTAATATGGATGGGGTAGCAATTGGaaggaaaattgatttgagtgCTCATAGTTCCTATGAAACCTTAGCACGAACTTTGGAGGATATGTTTAGCGAACACACTACAGGTCTCACCTGCAATAGATCAAATGGGGAGGATCATGGCGTTATGGTTGGAGCAGAAAGACAGTCAAAGTTTCTTGACGGATCTTCCAAGTTTGTGCTCACTTATGAAGACAAGGAAGGAGACTGGATGCTTGTTGGAGATGTTCCTTGGAGGATGTTCCTTAGCTCTGTGAAGAGACTAAGAATCATGAGGACATCAGACGCTAATGGACTTGCACCAAGATTGGAAGAAAAGAACAGCAGACAGAGAAGCATGCCCATGTA 938 0.4478 MQGSGDGVGAFSGDSNMSSVSKDHNLVLSSEDSSSPDESHLELGLGLSLSRPCAKPHPASTTQYARILTAEDFPSAVSPTSASSTSSSSSSSTPSSLSRANVTAGAKRTADSVVANNGPSQVVGWPPLGAYRMNSFNNHGKSPATEAFNSMVEKSKRNNAAVRNITDNGSEKTISTKDKGHPRSSLFVKVNMDGVAIGRKIDLSAHSSYETLARTLEDMFSEHTTGLTCNRSNGEDHGVMVGAERQSKFLDGSSKFVLTYEDKEGDWMLVGDVPWRMFLSSVKRLRIMRTSDANGLAPRLEEKNSRQRSMPM 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02629 312 MobiDBLite consensus disorder prediction 75 104 - -
Bva13g02629 312 Gene3D - 180 302 - -
Bva13g02629 312 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 19 303 IPR003311 GO:0005634|GO:0006355
Bva13g02629 312 MobiDBLite consensus disorder prediction 9 34 - -
Bva13g02629 312 Pfam AUX/IAA family 79 299 IPR033389 -
Bva13g02629 312 SUPERFAMILY CAD & PB1 domains 182 288 - -
Bva13g02629 312 MobiDBLite consensus disorder prediction 1 43 - -
Bva13g02629 312 ProSiteProfiles PB1 domain profile. 185 292 IPR000270 GO:0005515
Bva13g02629 312 PANTHER AUXIN-RESPONSIVE PROTEIN IAA11 19 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02629 Bva-Chr13 19534105 19537358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02629 189 299 B3 DNA Binding Superfamily AT1G59750 30.631 2.06e-12 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bva13g02629 AUX_IAA 1.5e-61 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02629 K14484 - gmx:100779400 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02733 04 23800401 23802901 Bva13g02629 13 19534105 19537358 BWGD
Bva13g02629 13 19534105 19537358 Bva13g02629 13 19534105 19537358 ECH