Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02628 ATGAAGAAGAACGGGATGCAATTGAGAACTCTGTTCTTCTTCTGTTGGATTTGTTGTTTCTCTTTTGCTGCTTCAGTGGAAGATGAAGTATCTGCTCTACTTTCTGTAAAAGCAGACCTTATTGATCCATTGAATGGCCTGCAAAGTTGGAAATTGTTGGACAAAGAACAAGGGAGGGATGCAGCTCATTGTAAATGGACTGGCGTCTGGTGCAACTCTGCAGGAGCTATAGAGAAGCTTGATCTCTCAAACAAGAATCTCAGTGGCAGAGTATCCAGTGAGTTACAGAGGTTAAAAGGTCTCACTTCTCTTAACTTGTCCTGCAATGGATTTTCATCAACATTGCCAAAATTCATAGCCAATCTCACTTCATTGAAGAGTCTTGATGTCAGCCAGAATTTCTTCACTGGTGACTTTCCAGTAGACCTTGGGAAGTTGTCACAACTTATGACCTTAAATGCATCCAGCAACGATTTCACAGGCTATCTTCCTGAGGACCTTGGAAATGTTTCTTCCTTAGAGACACTGGATCTCAGAGGCAGCTTCTTTGAAGGATCAATTCCAAAATCTTTCGGTAACTTGCAGAAGTTGAAGTTCCTTGGTCTTTCTGGGAATAATCTCACTGAGAAAATTCCCGGAGAGCTGGGACAGCTTTCATCTCTGGAGGTTATGATTCTTGGCTACAATGAATTTGATGGTGGGATTCCAGTAGAATTTGGAAATCTCACCAATCTTACGTACCTTGATTTGGCATTAGGCAATCTTGGTGGTGAGATTCCACATGAATTGGGAAAACTGAAGTTATTGAATACAGTTTTCTTATACAAGAACAAATTTGAAGGCAGAATTCCACCAGTATTTGGCAACATGACTTCGTTGCTGTTGCTCGATCTCTCTGACAATATGTTATCAGGAGAAATACCGGATTCATTATGTCAGCTGAAGAATTTGGTGCTCCTGAATCTCATGCGTAACCAGCTGTCCGGTCCTGTCCCGTCCGGACTTGGGAACTTGACTCAGTTGGAAGTACTTGAGCTGTGGAAGAATTCTTTGTCAGGGCCATTGCCTTGTAACCTTGGCCAGAATTCGCCACTGCAGTGGTTGGATGTATCCTCCAATTCACTCTCTGGCGAAATTCCACAAATGCTTTGCACGCATGGAAATCTCACCAAGCTTATCCTCTTCAATAATGCCTTCACAGGTCCAATTCCAGTTAGCCTATCAACGTGTCCTTCAATAGTTCGTGTTCGAATTCagaacaattttctttctggtaCAATTCCAGTGGGTCTTGGCAAACTTGAGAAGCTTGAGAGATTAGAATTGGCTAACAACAGTCTCACCGGTGAGATTCCAGATGATATAACCTCTTCCACAAcgctttctttcattgatttcTCCAGAAACAACCTCCATTCATCTCTGCCTTCCACCATTCTTTCCATCCCTAATCTTCAATCCTTCATGGTTTCCAATAATAACTTGGAAGGCGAAATTCCGGACCAATTCCAGGACTGCCCCTCACTTAGCATTCTTGATCTCTCATCAAATCGTTTCTCTGGAAACATTCCACCAAGCATTGCTTCATGCCAGAAATTGGTGAATTTGAATCTGAAGAACAACCAATTGATTGGAGAAATCCCAAAAGCAATCGCCATGATGCCTACATTGGCTATTCTTGATCTCTCCAACAACAATCTGACAGGTCGAATACCCAACAACTTTGGTATCTCTCCAGCCCTGGAATCACTCAATGTCTCTTACAACAGGCTAGAGGGCCCTGTCCCAGCAAATGGCTTGCTGAGAACAATAAACCCAAATGATCTTGTGGGCAATGCTGGCTTATGTGGCAGTGTCCTCCCTCCATGTGACCAAAACTCTGCCTATATGTTAAGGCGAGATAGCTCACATGCCAAGCACATTATTGCAGGATGGGTAATTGGAATATCATCAATCTTTGCTATTGGAATTGCAATTTTGGCAGCTAGATCTTTATATAAAAGGTGGTACGCAGGTGGATTCTGTTTCAGAGAGAGATTTTATAAGGGTGAAAAAGGGTGGCCTTGGAGATTGATGGCGTTCCAGAGGCTTAGTTTTACAAGTACTGATATTCTAGCTTGCATAAAGGAATCAAATGTGATTGGGATGGGTGCAACTGGGATTGTTTATAAAGCCGAGGTACCACAATCAAACACAGTTGTTGCAGTGAAAAAATTGTGGAGATCAGGATCTGATGTAGAAACAGGAAGCAGTGAGGACCTTGTAGGAGAGGTGAATCTTTTAGGGAGGCTAAGACATAGGAACATTGTTAGATTATTGGGATATCTTCACAATGACACTGATGTGATCATAGTTTATGAATATATGCACAACGGTAACCTTGGAGATGCCTTGCATGGCAAACAAGCAGAGAGGTTGCTTGTAGACTGGGTTTCACGTTATAACATAGCACTTGGAGTGGCACAAGGACTTGCTTATCTTCACCATGATTGTCATCCACCTGTCATCCATCGAGACATCAAGTCAAATAACATACTGCTTGATGCAAATTTTGAGGCTAGGATTGCAGATTTTGGTTTAGCCAAAATGATGATCCGGAAGAACGAAACAGTCTCCATGGTTGCTGGGTCTTATGGCTACATAGCCCCTGAATATGGATACTCCTTGAAGGTGGATGAAAAGATTGACATTTACAGTTATGGAGTAGTGCTATTAGAGCTTATAATTGGAAAACGACCATTAGATCCTGAGTTTGGAGAATCCGTAGACATAGTAGAGTGGATTAGGAGGAAGATTCGAGACAACAGGCCTTTAGAAGAAGCATTAGACCCCAACGTAGGAAATTGCAAACATGTTCAAGAGGAGATGCTCCTAGTACTCAGGATAGCACTTCTTTGCACTGCCAAACTCCCCAAGGACAGACCATCCATGAGAGATGTCATAATGATGCTTGGAGAGGCAAAGCCACGTAGAAAAAGCAGTAGCAACGATGAAAGACGTGCATCTAACAAAGAGATACCCGTTTTTAGCACATCTCCAGTAAATGGCCTTCTGTGGGAACCAAAACTAGGTCACATATg 3080 0.4201 MKKNGMQLRTLFFFCWICCFSFAASVEDEVSALLSVKADLIDPLNGLQSWKLLDKEQGRDAAHCKWTGVWCNSAGAIEKLDLSNKNLSGRVSSELQRLKGLTSLNLSCNGFSSTLPKFIANLTSLKSLDVSQNFFTGDFPVDLGKLSQLMTLNASSNDFTGYLPEDLGNVSSLETLDLRGSFFEGSIPKSFGNLQKLKFLGLSGNNLTEKIPGELGQLSSLEVMILGYNEFDGGIPVEFGNLTNLTYLDLALGNLGGEIPHELGKLKLLNTVFLYKNKFEGRIPPVFGNMTSLLLLDLSDNMLSGEIPDSLCQLKNLVLLNLMRNQLSGPVPSGLGNLTQLEVLELWKNSLSGPLPCNLGQNSPLQWLDVSSNSLSGEIPQMLCTHGNLTKLILFNNAFTGPIPVSLSTCPSIVRVRIQNNFLSGTIPVGLGKLEKLERLELANNSLTGEIPDDITSSTTLSFIDFSRNNLHSSLPSTILSIPNLQSFMVSNNNLEGEIPDQFQDCPSLSILDLSSNRFSGNIPPSIASCQKLVNLNLKNNQLIGEIPKAIAMMPTLAILDLSNNNLTGRIPNNFGISPALESLNVSYNRLEGPVPANGLLRTINPNDLVGNAGLCGSVLPPCDQNSAYMLRRDSSHAKHIIAGWVIGISSIFAIGIAILAARSLYKRWYAGGFCFRERFYKGEKGWPWRLMAFQRLSFTSTDILACIKESNVIGMGATGIVYKAEVPQSNTVVAVKKLWRSGSDVETGSSEDLVGEVNLLGRLRHRNIVRLLGYLHNDTDVIIVYEYMHNGNLGDALHGKQAERLLVDWVSRYNIALGVAQGLAYLHHDCHPPVIHRDIKSNNILLDANFEARIADFGLAKMMIRKNETVSMVAGSYGYIAPEYGYSLKVDEKIDIYSYGVVLLELIIGKRPLDPEFGESVDIVEWIRRKIRDNRPLEEALDPNVGNCKHVQEEMLLVLRIALLCTAKLPKDRPSMRDVIMMLGEAKPRRKSSSNDERRASNKEIPVFSTSPVNGLLWEPKLGHI 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02628 1026 Gene3D Phosphorylase Kinase; domain 1 708 792 - -
Bva13g02628 1026 SMART LRR_typ_2 194 218 IPR003591 -
Bva13g02628 1026 SMART LRR_typ_2 338 362 IPR003591 -
Bva13g02628 1026 SMART LRR_typ_2 554 578 IPR003591 -
Bva13g02628 1026 SMART LRR_typ_2 290 314 IPR003591 -
Bva13g02628 1026 SMART LRR_typ_2 506 530 IPR003591 -
Bva13g02628 1026 SMART LRR_typ_2 482 505 IPR003591 -
Bva13g02628 1026 SMART LRR_typ_2 98 122 IPR003591 -
Bva13g02628 1026 SMART LRR_typ_2 434 458 IPR003591 -
Bva13g02628 1026 Gene3D Ribonuclease Inhibitor 24 179 IPR032675 -
Bva13g02628 1026 Gene3D Ribonuclease Inhibitor 252 356 IPR032675 -
Bva13g02628 1026 ProSitePatterns Serine/Threonine protein kinases active-site signature. 835 847 IPR008271 GO:0004672|GO:0006468
Bva13g02628 1026 Gene3D Ribonuclease Inhibitor 180 251 IPR032675 -
Bva13g02628 1026 Pfam Leucine rich repeat N-terminal domain 27 72 IPR013210 -
Bva13g02628 1026 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 10 998 - -
Bva13g02628 1026 Pfam Protein kinase domain 710 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02628 1026 Gene3D Transferase(Phosphotransferase) domain 1 793 1010 - -
Bva13g02628 1026 PANTHER UNNAMED PRODUCT 10 998 - -
Bva13g02628 1026 SUPERFAMILY L domain-like 62 309 - -
Bva13g02628 1026 ProSiteProfiles Protein kinase domain profile. 708 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02628 1026 SUPERFAMILY Protein kinase-like (PK-like) 704 984 IPR011009 -
Bva13g02628 1026 SUPERFAMILY RNI-like 256 596 - -
Bva13g02628 1026 Gene3D Ribonuclease Inhibitor 363 627 IPR032675 -
Bva13g02628 1026 MobiDBLite consensus disorder prediction 985 1004 - -
Bva13g02628 1026 ProSitePatterns Protein kinases ATP-binding region signature. 714 738 IPR017441 GO:0005524
Bva13g02628 1026 MobiDBLite consensus disorder prediction 985 1006 - -
Bva13g02628 1026 SMART serkin_6 708 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02628 1026 Pfam Leucine Rich Repeat 558 575 IPR001611 GO:0005515
Bva13g02628 1026 Pfam Leucine rich repeat 483 543 IPR001611 GO:0005515
Bva13g02628 1026 Pfam Leucine rich repeat 172 230 IPR001611 GO:0005515
Bva13g02628 1026 Pfam Leucine rich repeat 100 159 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02628 Bva-Chr13 19529982 19533552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02628 7 1018 Receptor kinase-like Gene Family AT1G08590 59.942 0.0 1179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva13g02628 Pkinase 4.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02628 - - gmx:100811284 1618.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02628 13 19529982 19533552 Bva13g02628 13 19529982 19533552 ECH