Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02608 ATGGAAGATCAGGGCCAGGACCCAAATAGTCCAGTCCCTGGTTCCGAGAGAAGTGAACCGGTGAGGTCGAGGTGGACTCCAAAGCCAGAGCAAATCCTCATACTCGAGTCCATCTTCAACAGTGGCATGGTCAATCCTCCCAAGGATGAGACCGTCAGAATAAGAAAGCTCCTTGAGAAATTTGGCTCTGTGGGAGATGCCAACGTCTTCTACTGGTTCCAAAACCGCCGCTCCAGATCCCGCCGCCGGCAACGCCAGATGCAGGCCACCCTTGAGCAACAAAAACAGCTTCAGCCTCAATTCGGTGGTGCAATTCCATATGATCAAACCACCTCCGAAAATGCACCTATGTCTTTTGCTGCTTCCTCATCTTTTCCtgattcatcatcttcttatGATTTTGCCGGTTCCTCTTCCCCATGCGTTGCTTTTCCTGGCCAAGAATCCATGGATGGACTCTTTTCAGTCTCTGCGCAAATGGGTTTCCCTGAAATTGATCAAACTTCTGCTGCAGCATCAGTTTTATACCCTTCCGATGCTATAAATTTGAGCTACCACTCCGGTCTCATCACAGTGTTTATCAATGGGGTTGCAACAGAAGTTCCAAGGGGTCCAATGGACATAAGATCAATGTTTGGTCAAGATGCAATGTTGATTCATTCCTCAGGACTTCCAGTTCCTGTCAATGATTTTGGTTTCTTGATGCAGAGCTTGCAGCATGGTGAAAGCTATTTTCTGGTAATAATTAAGCCCATCtacaaattaatcaatta 773 0.4554 MEDQGQDPNSPVPGSERSEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQMQATLEQQKQLQPQFGGAIPYDQTTSENAPMSFAASSSFPDSSSSYDFAGSSSPCVAFPGQESMDGLFSVSAQMGFPEIDQTSAAASVLYPSDAINLSYHSGLITVFINGVATEVPRGPMDIRSMFGQDAMLIHSSGLPVPVNDFGFLMQSLQHGESYFLVIIKPIYKLIN 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02608 257 PANTHER WUSCHEL-RELATED HOMEOBOX 11 4 248 IPR044558 GO:0003700|GO:0048830
Bva13g02608 257 SMART HOX_1 20 87 IPR001356 GO:0003677
Bva13g02608 257 Gene3D - 22 91 - -
Bva13g02608 257 ProSiteProfiles 'Homeobox' domain profile. 18 83 IPR001356 GO:0003677
Bva13g02608 257 MobiDBLite consensus disorder prediction 1 27 - -
Bva13g02608 257 Pfam Homeodomain 22 82 IPR001356 GO:0003677
Bva13g02608 257 SUPERFAMILY Homeodomain-like 13 89 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02608 Bva-Chr13 19395218 19396893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02608 3 249 Wox Gene Family AT3G03660 53.137 2.47e-71 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Bva13g02608 Homeodomain 6.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02608 - - tcc:18599775 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02608 13 19395218 19396893 Bva13g02608 13 19395218 19396893 ECH