Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02595 ATGGCAACCAGAAAGGAAGAGgagagaaatgagaaaattataagagGACTTATGAAGCTTCCGCCAAATCGAAGATGTATTAACTGCAATAGTCtgGGGCCACAATATGTTTGTACGAACTTTTGGACTTTCGTTTGCATAGCATGCAGCGGGATACATCGTGAGTTTACTCATCGTGTGAAGTCCGTATCTATGGCAAAGTTTACGTCACAGGAAGTTGATGCTCTCCAAAATGGTGGTAACCAGCGTGCAAGGGAAGTATATTTGAAAGATTGGGACTTCCAAAGGCAGCGGTTGCCAGATAGCAGcAATGTCAACAAAATGAGGGAGTTTATCAAGAATGTATATGTGGACAGAAGATATGCTGGAGTGAGATCCTCCGACAAGCCTCCAAGAGATACGCAGAGCCCTAGAATCCATGAAGATGAGACTAGACGTGCCAGTTCATATCATTCATATTCTCAAAGTCCTCCATATGATTATCAATATGAAGATCGGCGGTATGGGAAACAAGCAGCTGCGCTGACCAGGAAGCCTGGTTCTGATAAAGGCCGCTATGAAGGGAAGATGTCTAGTTTTATCTATAGTCCTGGTCGCTTCAGTGATCATGCGACTGATGATAGGTTTGCAAATGAGGGAACTGGTCCAAGAATATCTGACTATTCTGTATCTAGTGACCCATTCAAATCTGAAATGCAGTCTCCGGAGTTCCATAAGGACACTGGAGTTAGCAGTCCACCCTATCTGTCTTCTAGGGCCAGTTCAAGTGAAGATGTATGGTCTCAAGCAAGAATTGCATCTCCAGAAACTAACACCAATAGAGACATAGATGGAATTCATCTTCCGCAGGATAAAATGTCTGGCATTCCACGACCATCTGCTCCTGCAAGGTCCGTTAGCTTGGATCTTCTAAAGGCACCAGTAGTACCTGAACCAATTTCGTCTTCAGCTTCTTCTGTTGATCTTTTTCAGTTACCAGCATCTTCTCAGCCTCCATCAGTGGATTTGTTtcaactctcttttttatctACAGCTTCATCTATTAATGAAATTCAGCCTTCGCAAATTTCCCAACCTTCACCTGTGGACTTATTTGCACAAATTTCTCAGCCGCAATCTGCTGCAACCTTAGATGAAAAGTTGCCAGAGTTGTCTGAACCTAAAAATGAAGGATGGGCAACATTTGATATGCCTCAGAGCACAGTATCTACTGTGCAGGTAGAAGATACAACTAGCATGCCTCCAAGCGATGAAACATTCCTGAGAAGATTTGATCCATTTTCAGCCTTTAACGGGACTCAATGGCCAACTTTTGAAACCCCTAGTGTTCATGGATTTTCTTCAAGTACATCTAATCCATGGCATGGTGGTGTATGGAATGGAAACGAGCAAGCCTCTGCAACTGCTACTAACTCTCAAgttTTGCATGTGGATACTGAACAGCCATGGAATGCTTTTGAAGATTCTAGTGCTCAGCTTCCTATAGAAGTTTTTAATCAAGGAGTAAATCTCTCATCAGTTGATGATCAACTTTTGGGTGTCATAGCTCCTGAGGGCTCCAATAACGGTGGGATGCTATCTGTTGTCGCTGTTGATGGATTTCATGATCATAACATTGCATCAGGTGTTGCCAGTGGTTTGCCATATCCTTCCTCTCTGCTTCCTCTGATGgGAGAGACTCAAACTAATGCAATCAGCCATAAATCAACAAATCCATTTGATATGCCGTTGGATTCTGATATAGAGAAAAACAATATGTTGCAGTTCCCGGATATGAGCTCTTTGCAAGCTGCTCTGCCTGATGCCCAGTTGTCATCCACCCTCCATAATGGGATAGCTGAACCATGGCTCCCTCAAAATTCAGTGACCCCCTATATTTCTGCATCTGGACAAGGTGGTTTGACCTACATGGCTGCGCAACCTCCAAGTTCTCAAATTCCGAACGTCCAGGCACATGGGCCAGTTGCTTCGATTGGGGTGAGAAAGGCCTA 1991 0.4294 MATRKEEERNEKIIRGLMKLPPNRRCINCNSLGPQYVCTNFWTFVCIACSGIHREFTHRVKSVSMAKFTSQEVDALQNGGNQRAREVYLKDWDFQRQRLPDSSNVNKMREFIKNVYVDRRYAGVRSSDKPPRDTQSPRIHEDETRRASSYHSYSQSPPYDYQYEDRRYGKQAAALTRKPGSDKGRYEGKMSSFIYSPGRFSDHATDDRFANEGTGPRISDYSVSSDPFKSEMQSPEFHKDTGVSSPPYLSSRASSSEDVWSQARIASPETNTNRDIDGIHLPQDKMSGIPRPSAPARSVSLDLLKAPVVPEPISSSASSVDLFQLPASSQPPSVDLFQLSFLSTASSINEIQPSQISQPSPVDLFAQISQPQSAATLDEKLPELSEPKNEGWATFDMPQSTVSTVQVEDTTSMPPSDETFLRRFDPFSAFNGTQWPTFETPSVHGFSSSTSNPWHGGVWNGNEQASATATNSQPWNAFEDSSAQLPIEVFNQGVNLSSVDDQLLGVIAPEGSNNGGMLSVVAVDGFHDHNIASGVASGLPYPSSLLPLMGETQTNAISHKSTNPFDMPLDSDIEKNNMLQFPDMSSLQAALPDAQLSSTLHNGIAEPWLPQNSVTPYISASGQGGLTYMAAQPPSSQIPNVQAHGPVASIGVRKA 655
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02595 655 PANTHER ARFGAP/RECO-RELATED 1 649 IPR044820 GO:0005096
Bva13g02595 655 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD14-RELATED 1 649 - -
Bva13g02595 655 SUPERFAMILY ArfGap/RecO-like zinc finger 9 122 IPR037278 -
Bva13g02595 655 SMART arf_gap_3 11 129 IPR001164 GO:0005096
Bva13g02595 655 PRINTS HIV Rev interacting protein signature 23 42 IPR001164 GO:0005096
Bva13g02595 655 PRINTS HIV Rev interacting protein signature 60 81 IPR001164 GO:0005096
Bva13g02595 655 PRINTS HIV Rev interacting protein signature 42 59 IPR001164 GO:0005096
Bva13g02595 655 ProSiteProfiles ARF GTPase-activating proteins domain profile. 11 129 IPR001164 GO:0005096
Bva13g02595 655 MobiDBLite consensus disorder prediction 209 254 - -
Bva13g02595 655 MobiDBLite consensus disorder prediction 122 162 - -
Bva13g02595 655 MobiDBLite consensus disorder prediction 217 254 - -
Bva13g02595 655 MobiDBLite consensus disorder prediction 122 148 - -
Bva13g02595 655 CDD ArfGap_AGFG 11 121 - -
Bva13g02595 655 Gene3D Arf GTPase activating protein 1 130 IPR038508 -
Bva13g02595 655 Pfam Putative GTPase activating protein for Arf 12 122 IPR001164 GO:0005096
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bva13g02595 Bva-Chr13 19330947 19337009 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02595 14 88 C2H2 Transcription Factor Family AT4G05330 36.709 1.26e-11 64.7
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02595 K15044 - gmx:100788316 789.26
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02595 13 19330947 19337009 Bva13g02595 13 19330947 19337009 ECH