Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02585 ATGGATCATTACAAGGTTCTAGGGTTGAATAGAAATGCTtctaaagaagaaataaaggcGGCGTTCAAGAAATTGGCTTTTGAGTTCCACCCGGACAAGCATTCGCAATCATCCAAAGCCGTCAAGGACAATGCTACTCTCCGATTCAAGCATGTCTCTGAGGCCTACCAGGTGCTCATGGATGATCGAAAACGTGCTGACTACAATATACGGTCGAGAGCTGGTAGCAGTGGCTATGGCAGAAGTGGTTATGGTTATAATCACAATTATTCCTATAGTTATAACTATGGCGGCAGTGGGAGGACTTATGAACCTAGGTATAAATCTAGGTCTGGCTTTAACGTCGATGGCATTACGTCAAAGTTTGAGCTTGCTCTTCGGTTTCTGACAACCCGAGCTTTTCTCCTCAATCTTGGCTTTGCAGGACTTTTATTAGGTGGGATGACTGTCATTGAATCAAGCGGAGAAGCCATATGGAAGATGAAAAATTCTGGGAAATCATTCGAAGAAGCCATGGAGTCCATTGAGAAAGCCAAAgctcaaacgaagaaagaccattg 560 0.4071 MDHYKVLGLNRNASKEEIKAAFKKLAFEFHPDKHSQSSKAVKDNATLRFKHVSEAYQVLMDDRKRADYNIRSRAGSSGYGRSGYGYNHNYSYSYNYGGSGRTYEPRYKSRSGFNVDGITSKFELALRFLTTRAFLLNLGFAGLLLGGMTVIESSGEAIWKMKNSGKSFEEAMESIEKAKAQTKKDH 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02585 186 ProSiteProfiles dnaJ domain profile. 2 72 IPR001623 -
Bva13g02585 186 CDD DnaJ 2 61 IPR001623 -
Bva13g02585 186 PRINTS DnaJ domain signature 44 64 IPR001623 -
Bva13g02585 186 PRINTS DnaJ domain signature 22 37 IPR001623 -
Bva13g02585 186 PRINTS DnaJ domain signature 4 22 IPR001623 -
Bva13g02585 186 PRINTS DnaJ domain signature 64 83 IPR001623 -
Bva13g02585 186 SMART dnaj_3 1 64 IPR001623 -
Bva13g02585 186 Gene3D DnaJ domain 1 122 IPR036869 -
Bva13g02585 186 SUPERFAMILY Chaperone J-domain 1 99 IPR036869 -
Bva13g02585 186 ProSitePatterns Nt-dnaJ domain signature. 49 68 IPR018253 -
Bva13g02585 186 PANTHER CO-CHAPERONE PROTEIN DJLA 1 173 - -
Bva13g02585 186 PANTHER CHAPERONE PROTEIN DNAJ 72 1 173 - -
Bva13g02585 186 Pfam DnaJ domain 2 69 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02585 Bva-Chr13 19280622 19283317 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02585 3 69 C2H2 Transcription Factor Family AT1G74250 37.313 1.24e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02585 - - gmx:100782769 208.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02585 13 19280622 19283317 Bva13g02585 13 19280622 19283317 ECH