Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02577 ATGTATCAGACAAAGAAGTTTTCAACGGGAACCATAGTGCCACACAAAGCTCAAGGTAGTAGTGAACGACTTGCAAATGTTGGCGTTTTGGCTGGACCTGCTGTAAAAAATGCGGCTCCTGCCGGGGGAAGTGGAAAACAGCGGTTGCGTTGGACATCAGATCTTCATGACCGCTTCGTGGATGCTATTACACAACTTGGTGGACCTGATAGGGCAACACCAAAGGGTGTTCTGAGAGTGATGGGTGTACCTGGACTTACAATTTATCACGTCAAAAGCCATTTACAGAAGTATCGCCTTGCAAAGTACCTGCCTGAATCTTCAGCTGATGATAAAGATTCTaaagatgagaaaaagaaTTCTGGAGACAGTGTTTCTGGCACAGATTCTTCCCTGGGATTGCAAATAAATGATGCTTTGAGAATGCAGATGGAGGTTCAGAAGCGTCTCCATGAACAGCTAGAGGTTCAAAGACAGTTACAAATGAGAATTGAAGCACAGGGGAAATACTTGCAAAAGATTATAGAGGAACAGCAGAAACTAGGTTCTACCTTGAGTGCCTCAGAGACACTACCATCCAAAGATAAGGAAGATCCTTTTCAGTCTGAGCCCCATCTTGATGTCTCAGCGGGGACCTTGTCTCCgttaaaaaaacagaaaagtgaTGATGGTTCAAAGGACAGCTTCACTGCTTCTAAGGTGCCATCAAAGACTGCTAAGGAAACTGATTTTGTTGGTCACTTGAACCCAAACATGTATGGAGATGATGCTGGGTTTGGATTTAACTTGGAAACAGAATTCAGAAAGGAGGAACATAAGGATTA 824 0.4235 MYQTKKFSTGTIVPHKAQGSSERLANVGVLAGPAVKNAAPAGGSGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESSADDKDSKDEKKNSGDSVSGTDSSLGLQINDALRMQMEVQKRLHEQLEVQRQLQMRIEAQGKYLQKIIEEQQKLGSTLSASETLPSKDKEDPFQSEPHLDVSAGTLSPLKKQKSDDGSKDSFTASKVPSKTAKETDFVGHLNPNMYGDDAGFGFNLETEFRKEEHKD 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02577 274 Pfam Myb-like DNA-binding domain 49 99 IPR001005 -
Bva13g02577 274 MobiDBLite consensus disorder prediction 107 132 - -
Bva13g02577 274 Pfam MYB-CC type transfactor, LHEQLE motif 134 180 IPR025756 -
Bva13g02577 274 Gene3D - 45 104 - -
Bva13g02577 274 SUPERFAMILY Homeodomain-like 45 100 IPR009057 -
Bva13g02577 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 103 IPR017930 -
Bva13g02577 274 MobiDBLite consensus disorder prediction 183 248 - -
Bva13g02577 274 PANTHER OS05G0491500 PROTEIN 4 271 - -
Bva13g02577 274 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 46 101 IPR006447 GO:0003677
Bva13g02577 274 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 4 271 IPR044848 GO:0003700
Bva13g02577 274 Coils Coil 137 157 - -
Bva13g02577 274 MobiDBLite consensus disorder prediction 107 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02577 Bva-Chr13 19225423 19229085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02577 33 206 G2-like Transcription Factor Family AT3G04450 48.571 3.50e-52 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva13g02577 Myb_DNA-binding 2.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02577 - - gmx:100783132 383.259