Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02563 ATGGGTCGGGCTCGCCTGCTTCTTTCGGATTTTATTGTGTCTTTCATGTGGGTATGGTCGGGGGTTCTTGTTAAGATACTTGtctacaaatattttagttttggtcATCAGCCCCATGGTGAGATTGTCAAGTGTGCTTTTTCCATTATGAACATGttcttctttgcttttctaGCTAAAATTACCAAAGGTGGCGCCTACAATCCTCTCACAGTTTTATCTGGTGCCATTTCCGGGGATTTCAGCAACTTCCTTTACTGTGTTGGTGCCAGGATTCCCGTTCAGGTGCTTGGATCCATTTATGGGGTTAAGCTTATTATTGATACCATTCCTGAAGCAGGAAGCGGACCACGTCTGAATGTAGACATTCATCGAGGTGCACTTACAGAAGGTCTCCTCACATTTGCAATTGTATTTATCTCACTTGGACTCGCCACAAAAATCCCTGGAAGTTTCTTCATGAAGACTTGGATCTCCAGTGTCTCCAAGTTAACACTTCACATACTTGGCTCTGATCTTACTGGAGGTTGTATGAACCCAGCTTCTGTAATGGGATGGGCTTATGCTCGAAGAGATCACATAACCAAGGAGCACATCCTTGTCTACTGGCTAGCTCCCATAGAGGCAACTCTACTGGCAGTGTGGACATTCAAATTGCTTGTAAGGCCAGCCaaagagaaaagtaaatcAGCCTG 695 0.4201 MGRARLLLSDFIVSFMWVWSGVLVKILVYKYFSFGHQPHGEIVKCAFSIMNMFFFAFLAKITKGGAYNPLTVLSGAISGDFSNFLYCVGARIPVQVLGSIYGVKLIIDTIPEAGSGPRLNVDIHRGALTEGLLTFAIVFISLGLATKIPGSFFMKTWISSVSKLTLHILGSDLTGGCMNPASVMGWAYARRDHITKEHILVYWLAPIEATLLAVWTFKLLVRPAKEKSKSA 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02563 231 Gene3D Glycerol uptake facilitator protein. 3 230 IPR023271 -
Bva13g02563 231 SUPERFAMILY Aquaporin-like 4 226 IPR023271 -
Bva13g02563 231 PANTHER AQUAPORIN SIP2-1-RELATED 1 229 - -
Bva13g02563 231 Pfam Major intrinsic protein 5 216 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva13g02563 231 PRINTS Major intrinsic protein family signature 129 147 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva13g02563 231 PRINTS Major intrinsic protein family signature 87 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva13g02563 231 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva13g02563 231 PRINTS Major intrinsic protein family signature 200 220 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva13g02563 231 PRINTS Major intrinsic protein family signature 160 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva13g02563 231 PANTHER AQUAPORIN SIP2-1-RELATED 1 229 IPR044226 GO:0015267
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02563 Bva-Chr13 19168975 19171703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02563 1 229 Major Intrinsic Protein MIP AT3G56950 63.478 1.84e-106 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02563 K09875 - gmx:100786138 379.407