Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02558 ATGGAGCGCAATTCGGGTCAAGACTCTAATCCGTCACCTGGGTCCTTTGATAAGTCCAGGGTTTTGAATGTTAAGCCATTGCGAACTCTTGTTCCTGTATTCCCTTCACAATCTAACCCTTCTCCATTTTCAACTCCCCAAGGCGGTGCCCCATTTGTTTGTGTTTCTCCATCTGGTCCTTTTCCTCCTGGGGTTGCCCCTTTCTACCCATTTTTTGTCTCACCAGAGTCCCAGAGGTTCGCTGAACAAACACCACAACCCACAACTGCTACGCCTAGGCGACGTGTAGCTCCCATAGCTACAGCAGTTCCTATCAATGCTGTAGCTTCAAATGGAGATGTGGGCTCATCAAGAAGGACAGGAAATAGTGGGTACACTGATGAAGATGTGTATATCGAGATACATGAAACAGATGCTGATGATGGTTCTAAGGGAAAGAAGATAACGACCAGGTCCCAGAAGAGGGGAAGGGGACGGCCGAGAAAGGCTGTATCTGATGTTGATGTGGAAGAAGAGGCCCAAAATCTTCTCAAATCACTCAATCCCATAGTTTTTTCCACATTAAATCAAACTGAGGGTAGTAAGGACTCAGTTTCTTATGCACTCATGATATTTGAAGTGCTAAGAAGAAGGATACATCAAATTGAAGAGGCAAGGGGTGAGAATCCTGGAGCAGCGCGGCGACCCGATTTAAGGGCAGCTGCTATTATGTTGAAAAAAGGGGTTCGGACAAATAGCAAAAAACGCATTGGAGCTGTGCCTGGGGTTGAAGTTGgggatattttctttttcagaatgGAATTGTGCTTAGTGGGATTGCATGCTCCATCTATGGCTGGGATTGATTACATGGGAATCAAAATCAGTCAAGAGGAAGAGCCACTAGCAGTGAGCATTGTATCATCTGGAGGGTATGAAGATAATGTGGAGGATGCCGATGTGCTGATTTACAGTGGCCAAGGCGGGGTTAACCGCAACGATAAGGAAGTAAAGGATCAAAAGCTTGAAAGGGGTAATCTTGCATTGGAAAAGAGCCTGCATCGCGGTAATGATGTGAGAGTGGTTAGGGGTTTAATGGACCCTGCACATCCAACAGGGAAGATATATGTCTATGATGGTCTTTATAAGATCCAAGACTCATGGGTGGAGAAAGGAAAGTCAGGTGCCAATGTATTCAAGTATAAATTGTTCAGGCTGCCTGGGCAACCTGAAGCATATACAACATGGAAAAACATTCAGCAATGGACTGAAAACAAGTCCACTTCAAGAGTAGGGGTTATATTGCCTGATCTTACTTCTGGAGCAGAAAAGCATCCTGTTTGTCTTGTGAATGATGTTGATAGTGAGAAGGGACCTGCATATTTCACTTACATTCCTACTCTCAAGTATTCAAAGCCGATTGATCCAGTAGAACCTTCCACTGGATGTGGTTGTGTCGGTGGATGCCAACCTGGCAACTTCAACTGTTCTTGCATTCAAAAGAATGGAGGGTATCTTCCATATGCTCCAAATGGAGTGCTCATGAACCTAAAATCCGTGATATATGAGTGTGGTCCATCCTGTCAGTGTCCCTCTAATTGTCGAAACCGGGTGTCCCAATGTGGCTTGAGGATTCGTTTAGAGGTGTTTAGAACTAAGAATAGGGGTTGGGGTCTAAGATCCTGGGATCCTATTCGTGCAGGAGCTTTTATATGTGAGTATGCAGGTGAAGTCATTGATAATACTAGAGTAGAAGAGCTAggtagtcaaaatgaagatgattACATTTTTGATTCTACCCGCATTCATCAACAACTGGAAATTTTCCCTAGTGATAGCGAAGCTCCTAAAATCCCATATCCTCTATATATAACATCCAAAGATGCTGGAAATGTGTCTAGATTTATGAATCACAGCTGCTCACCAAATGTGTTCTGGCGTCCAATCTTgcgagaaaacaaaaatgagtCTGATCTTCACGTTGCTTTCCATGCTGTCAGACATATTCCTCCTACGACAGAGTTGACCTATGATTATGGGATAGTTCTTCCTCTCAGAGCGGgccagaagaaaaagaaatgcttATGTGGATCGGAGAAATGCCGGGGTtacttttgttg 2099 0.4254 MERNSGQDSNPSPGSFDKSRVLNVKPLRTLVPVFPSQSNPSPFSTPQGGAPFVCVSPSGPFPPGVAPFYPFFVSPESQRFAEQTPQPTTATPRRRVAPIATAVPINAVASNGDVGSSRRTGNSGYTDEDVYIEIHETDADDGSKGKKITTRSQKRGRGRPRKAVSDVDVEEEAQNLLKSLNPIVFSTLNQTEGSKDSVSYALMIFEVLRRRIHQIEEARGENPGAARRPDLRAAAIMLKKGVRTNSKKRIGAVPGVEVGDIFFFRMELCLVGLHAPSMAGIDYMGIKISQEEEPLAVSIVSSGGYEDNVEDADVLIYSGQGGVNRNDKEVKDQKLERGNLALEKSLHRGNDVRVVRGLMDPAHPTGKIYVYDGLYKIQDSWVEKGKSGANVFKYKLFRLPGQPEAYTTWKNIQQWTENKSTSRVGVILPDLTSGAEKHPVCLVNDVDSEKGPAYFTYIPTLKYSKPIDPVEPSTGCGCVGGCQPGNFNCSCIQKNGGYLPYAPNGVLMNLKSVIYECGPSCQCPSNCRNRVSQCGLRIRLEVFRTKNRGWGLRSWDPIRAGAFICEYAGEVIDNTRVEELGSQNEDDYIFDSTRIHQQLEIFPSDSEAPKIPYPLYITSKDAGNVSRFMNHSCSPNVFWRPILRENKNESDLHVAFHAVRHIPPTTELTYDYGIVLPLRAGQKKKKCLCGSEKCRGYFC 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02558 699 SMART G9a_1 246 402 IPR003105 -
Bva13g02558 699 ProSiteProfiles YDG domain profile. 251 398 IPR003105 -
Bva13g02558 699 SMART preset_2 428 522 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Bva13g02558 699 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 99 698 IPR025794 GO:0016571
Bva13g02558 699 SMART set_7 538 679 IPR001214 GO:0005515
Bva13g02558 699 ProSiteProfiles Post-SET domain profile. 683 699 IPR003616 -
Bva13g02558 699 Pfam SET domain 549 673 IPR001214 GO:0005515
Bva13g02558 699 ProSiteProfiles SET domain profile. 538 673 IPR001214 GO:0005515
Bva13g02558 699 SUPERFAMILY SET domain 438 696 IPR046341 -
Bva13g02558 699 MobiDBLite consensus disorder prediction 137 167 - -
Bva13g02558 699 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 12 698 - -
Bva13g02558 699 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 12 698 - -
Bva13g02558 699 Pfam SAD/SRA domain 250 402 IPR003105 -
Bva13g02558 699 Pfam Pre-SET motif 432 530 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Bva13g02558 699 Gene3D - 233 420 IPR036987 -
Bva13g02558 699 MobiDBLite consensus disorder prediction 1 21 - -
Bva13g02558 699 MobiDBLite consensus disorder prediction 1 17 - -
Bva13g02558 699 ProSiteProfiles Pre-SET domain profile. 474 535 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Bva13g02558 699 SUPERFAMILY PUA domain-like 233 420 IPR015947 -
Bva13g02558 699 Gene3D SET domain 421 698 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02558 Bva-Chr13 19151133 19155720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02558 1 698 Su(var)3-9 homologs AT1G73100 47.665 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bva13g02558 SAD_SRA 3.7e-50 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02558 K24405 - gmx:100805932 1035.79