Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02544 ATGGGAAAGGCCGAAGAACAACAGCCTTTGCCTTCCAGTGTGGCCTCCCAGGATTCGGGGCAGAATGTGGGGGCCAGGTCTGGATGTGGGTGTGCTGCAATTCGAAAATTTATTGGTCTCAGATGCATTTTCGTCCTGCTTTTGTCTGCTGCTGTATTCCTCTCTGCTGTATTTTGGTTGCCCCCGTTTCTTCGATACGCAGATCAGAAGGATCTGCATTCCGATGCAAGATATAAAGGTCATGATATCGTTGCAAGTTTTATTGTCAAGAAGCCAGTCTCTTTGCTGCAAGACAACATCTTGCAGCTTGAGAATGACATTTTTGAGGAGACACCAGTTCCCTCCACCAAGGTGGTGATATTATCTCTAGACCCCATGTCTGGGTCAAACAAGACAAAAGTTGTGTTTGCGGTTGATCCTGATGATAAATATTCAGAAATGCCTTCAGCTGCTGTAAGTTTGACCAGACCAATCTTCGAAGATCTAGTTATAGGTCAATCAATTCTCCGTCTCACTTCATCTTTGTTCGGAGATACCTTCTCTTTTGAAGTGCTGAGATTCAGGGGTGGAATTACAATTATTCCGCCACAGCATGCCTTTCTTCTGCAGAAAGTGCAATCACTATTCAACTTTACTTTGAATTCCTCTATTTATCAAATTCGAATGAATTTCCATGAACTGACAAGTCAGCTAAAGTTGGGATTACATCTGGCATACTATGAGAACTTGTATGTCATCTTATCAAATGCTGAAGGTTCAACTGTAGTTCCTCCTACTATTGTTCAGGCATATATAGTACCTGAGATTGGGAATAATCCATCAAAGGAAAGATTAAAACAACTGGCTCAAACCATCGCAAATTCTCATTCAAAGAACCTTGGCCTGAACCACACCGAATTTGGAAGGGTTAAGCAGGTTCAACTTTCATCCATCTTACAACACTCCCTTCATGGTGGTGATAATGGTAGCACTGCTCGGTcaccttctccttctcctgcTCCTGTTCCTGTTCCTGTTCCCCATCCACACCACCATCACCACCATCATcagcatcatcatcatcatcaccaaAATGCTCATCTAGCTCCTTCTGTTTCACCTGCATATGCACCTGCTCCTACAACTGCACCTGCTAATGGGAGGGGAGTAACTCCACCTGAGGTTGGTTCTCCTGCTGCTGCAAAAAGTGTGCCTCCACCTAGGAGTTCTCAAGCTGAGTCTCCTAATTGTCAATTTGGGTATAGAAAGGGGCCTACCAGGAAGGTCGGAAAGCATACTCATCTCACTCCTGCAGTTGCACCTATTACACCTCCACACAGTTCTGCTGCCTCACCAAAACAACAAGTGGAACCACCGGCACATGTCTCTCATTCAGTTCCTGCATTGAGTCCATTGCCAAATGTAGCTTTTGCTCATGCTGAGCCCCCTCCTAAGAGTGAACCACCTGCAGAACATTCTAACATCCATTTTCATGGGCCATcaacatcttcatcttcatCTTCTGCAGGTCATCTTTGGACTGTTAAATGGAGAAGTTTATTGTTTGTAGTCGTACTTGTGTTGCATATGTA 1571 0.4271 MGKAEEQQPLPSSVASQDSGQNVGARSGCGCAAIRKFIGLRCIFVLLLSAAVFLSAVFWLPPFLRYADQKDLHSDARYKGHDIVASFIVKKPVSLLQDNILQLENDIFEETPVPSTKVVILSLDPMSGSNKTKVVFAVDPDDKYSEMPSAAVSLTRPIFEDLVIGQSILRLTSSLFGDTFSFEVLRFRGGITIIPPQHAFLLQKVQSLFNFTLNSSIYQIRMNFHELTSQLKLGLHLAYYENLYVILSNAEGSTVVPPTIVQAYIVPEIGNNPSKERLKQLAQTIANSHSKNLGLNHTEFGRVKQVQLSSILQHSLHGGDNGSTARSPSPSPAPVPVPVPHPHHHHHHHQHHHHHHQNAHLAPSVSPAYAPAPTTAPANGRGVTPPEVGSPAAAKSVPPPRSSQAESPNCQFGYRKGPTRKVGKHTHLTPAVAPITPPHSSAASPKQQVEPPAHVSHSVPALSPLPNVAFAHAEPPPKSEPPAEHSNIHFHGPSTSSSSSSAGHLWTVKWRSLLFVVVLVLHM 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02544 523 PANTHER F20B24.21 1 519 - -
Bva13g02544 523 MobiDBLite consensus disorder prediction 315 502 - -
Bva13g02544 523 MobiDBLite consensus disorder prediction 340 359 - -
Bva13g02544 523 MobiDBLite consensus disorder prediction 1 22 - -
Bva13g02544 523 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02544 Bva-Chr13 19052770 19057354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02544 1 522 C3H Transcription Factor Family AT3G10810 44.933 3.52e-103 317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02544 13 19052770 19057354 Bva13g02544 13 19052770 19057354 ECH