Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02538 ATGTCAGATAGAATCTCAGTAGGAGATGTCGAGGACAGAAAGCTTAAGCGCCAGTTTGAGGAGGACACAGACGATTCACTGACTCTGAGGCTTTGCAGCAATTACCACAAGGGAGGCTCAGGCTCAGGCTCAGGCTCAAGCTCAGCCACCAAAGCCGAGTTAGGAGTCGGAGAATCTAATTTATCTGCTTCAAAAGGTTTGGATGTGGAGCCCTCTAGGTGGCGGCGGAAGAAGCAGCGCCAAttcatttgtaaattttgCAACCAACATTTCAGATCTGGACAGGCGTTAGGAGGGCATCAGAATGCCCATCGAGGTAAGCTTGACCTCACAAAGAAGATGGACCAAGAGATGGAGTTGGGTCATTCAAATTTAGGGCCAAGCCTTGCTCCAGCTCCTTATAATTCTCCAATGGCCAAACTTCCAACCCTTGATGGGTCCCTTCTATCCCATCATGGGGCCCACATGCCACCACCTGCAGGAGCTACGTCTTGGCCTAGTCATGGTCATGGTCATGTTCATGGATATGGCTATGGGACTGGAAGCACATATGTTCCTGCCGCACCTACTGCTGGTGAGTTTGAATCTGCTTCGTCGCTTGCCATTCTCAATGTAAATTCAAACAATCCTCCTGTTGCtgctggtggtggtggtgttAATATTGGAGGCCTTCAGGAGAACCGCAGTGAGGGGTACAACCAGCAACAGGGTCCAGCCACAGGGGTGGGGGAAGAGCAAGACCTAGACTTGTCCCTCAGCCTTTA 764 0.4869 MSDRISVGDVEDRKLKRQFEEDTDDSLTLRLCSNYHKGGSGSGSGSSSATKAELGVGESNLSASKGLDVEPSRWRRKKQRQFICKFCNQHFRSGQALGGHQNAHRGKLDLTKKMDQEMELGHSNLGPSLAPAPYNSPMAKLPTLDGSLLSHHGAHMPPPAGATSWPSHGHGHVHGYGYGTGSTYVPAAPTAGEFESASSLAILNVNSNNPPVAAGGGGVNIGGLQENRSEGYNQQQGPATGVGEEQDLDLSLSL 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02538 254 ProSitePatterns Zinc finger C2H2 type domain signature. 84 104 IPR013087 -
Bva13g02538 254 MobiDBLite consensus disorder prediction 149 168 - -
Bva13g02538 254 Gene3D Classic Zinc Finger 62 124 - -
Bva13g02538 254 SUPERFAMILY beta-beta-alpha zinc fingers 79 107 IPR036236 -
Bva13g02538 254 MobiDBLite consensus disorder prediction 211 254 - -
Bva13g02538 254 Pfam C2H2-type zinc finger 82 106 - -
Bva13g02538 254 ProSiteProfiles Zinc finger C2H2 type domain profile. 82 109 IPR013087 -
Bva13g02538 254 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 10 254 IPR044246 GO:0009788
Bva13g02538 254 MobiDBLite consensus disorder prediction 226 241 - -
Bva13g02538 254 MobiDBLite consensus disorder prediction 36 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02538 Bva-Chr13 19024519 19025283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02538 78 126 C2H2 Transcription Factor Family AT5G01860 44.898 5.93e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02538 - - aprc:113874385 89.7373