Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02537 ATGGGGATAGAGATTGTGGAGCCAAACACGTGCATTAGGGGTTGCTGCACAAGCTCATCCATTCCTCTGCATCTCCCTCCTTCCTCTTATACTCTCCTTTCACCAATTGCCCGGGGGGCTGAAAGTGTTGTTTATGAAGGCACTTTGAATGGTAAGAAGGTTGCCGTGAAGAAACCCATCTTGTCAACTTCAGAAGACATTCATAAGTTCCATAAAGAATTGCAGTTGCTATGTAAGCTAGATCATCCAGGAATTGCAACATTGATTGCTGCTCATGCAAAGCCACCCaattacctttttttcttcGAGTTCTATGAATCTCCCAATCTTGCACAGAAGTTACATGCGGAGGAATGGAGTCCGAGTATCAGTCAGGCGCTTACAATGACAATTCAGCTAGCAAAGGCTTTGCAATATCTGCATCATCTTGGAATTCTACACAGAGATGTGAAACCGGCAAATATTCTTCTTGACCAAAATCTTTGTCCACACCTTACGGATTTTGGTTTGGCAGAATACAAGAACGATCTTAAGGGAGTATCTCTTGAGAATTGGAAGTCCTCTGGCAAGCCCACTGGTGGTtttcataaaaagaatatggtTGGGACGCTCATTTACATGGCACCTGAAATATTAAGAAAGGAGTTGCATACAGAAAAGTCAGATATATACAGTTTTGGGATAGCAATAAACGAGCTCCTTACTGGTGTTGTCCCATATACTGATCTTCGTGCAGAAGCTCAGGCCCACACAGTGCTGGAAATGAACTATACTGAGCAACAACTGACAGCAGCTGTGGTTTCTGATGGATTACGGCCAGTCCTTGCAAGTCAGGAATTGGGTGTATCATCAAGATTATTATCACTGATAGAGAGGTGCTGGGACGTAAACCCTGCAAACAGACCTTCCTTTGATAATATAGTTGGGGAACTTGATAGCATTATGGAGGATAGAAAGGCAAAGAACATAGAAGACATACACCTTAGATCTTGTAATTCATGTCTTGATCAACTTGTGGATGAGACCAATCACCTTTATCAAGAGAGTGTTAACTGGTCCACTCAGGGAGAACTTTTCTCCGGGAGTGCCTCTTTTGCAGCTGATTCTGATTTAAGAACTTGGCACGAGTCTTATAAGGAGCCTCTTGCTTACTGTCCCACACTTTCCACGGGATCTTATGCTACCTGTGGGAGAAGGGAGACAATGGAGGATACACATTTTATTCTGCCCTGTATGTGTGGTGAAAAGGATATCCATGGTTTTGGTATTTTTGATGGTCATAGAGGTGCAGCAGCTGCTGAGTTTTCTGCACAAGCTTTGCCAGGACTCTTGCAAACTTCAGGTTCTGTGGGCAGTCCCACTAATGCACTAGTCGAAGCATTCCTTAGGACAGACGTTGCATTCAGGAAAGAGCTAGATTCTTAtcataaatccaagagagGAATCCAGAAGGATTGGCATCCCGGTTGTACAGCGGTAGTTGCTCTTATAGTTGGAAACAAGCTTTTTGTTGCTAACATTGGTGACTGCAGGACAATCTTATGTCGGGCTGGTTGTCCTGTCGCTCTAAGTAAGgaTCATGTTGCAAGCTGTCCTGAAGAAAGAGATCGTGTTGTTCGTCATGGAGGGCAAGTCAAATGGCTAGTTGATACCTGGAGGGTCGGTCCTCCTGCTCTTCAGGTTACTCGTTCAATCGGTGATGATGATCTGAAGCCTGCTGTGACTGCAGAACCTGAAATAACTGAAACTGCTTTGTCTGCGGAGGATGAATATCTGgTGATGGCCAGTGATGGACTCTGGGATGTGATGAGCAATGCAGAGGTCATAAGCATCATCAAAGACACTGTTAAAGAGCCAGGGATGTGCTCTAAGAGGCTGGCGACCGAAGCAGTAGAACGAGGTAGCAAGGACAACATCACAGTTATTGTTGTCTTCTTACGTCCTGTATCTACTGCAGAGAGAATTTATTa 1970 0.434 MGIEIVEPNTCIRGCCTSSSIPLHLPPSSYTLLSPIARGAESVVYEGTLNGKKVAVKKPILSTSEDIHKFHKELQLLCKLDHPGIATLIAAHAKPPNYLFFFEFYESPNLAQKLHAEEWSPSISQALTMTIQLAKALQYLHHLGILHRDVKPANILLDQNLCPHLTDFGLAEYKNDLKGVSLENWKSSGKPTGGFHKKNMVGTLIYMAPEILRKELHTEKSDIYSFGIAINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSDGLRPVLASQELGVSSRLLSLIERCWDVNPANRPSFDNIVGELDSIMEDRKAKNIEDIHLRSCNSCLDQLVDETNHLYQESVNWSTQGELFSGSASFAADSDLRTWHESYKEPLAYCPTLSTGSYATCGRRETMEDTHFILPCMCGEKDIHGFGIFDGHRGAAAAEFSAQALPGLLQTSGSVGSPTNALVEAFLRTDVAFRKELDSYHKSKRGIQKDWHPGCTAVVALIVGNKLFVANIGDCRTILCRAGCPVALSKDHVASCPEERDRVVRHGGQVKWLVDTWRVGPPALQVTRSIGDDDLKPAVTAEPEITETALSAEDEYLVMASDGLWDVMSNAEVISIIKDTVKEPGMCSKRLATEAVERGSKDNITVIVVFLRPVSTAERIY 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02537 656 SUPERFAMILY PP2C-like 378 648 IPR036457 -
Bva13g02537 656 SUPERFAMILY Protein kinase-like (PK-like) 17 316 IPR011009 -
Bva13g02537 656 Gene3D - 384 651 IPR036457 -
Bva13g02537 656 SMART serkin_6 30 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02537 656 ProSiteProfiles PPM-type phosphatase domain profile. 389 646 IPR001932 -
Bva13g02537 656 SMART PP2C_SIG_2 404 646 IPR001932 -
Bva13g02537 656 Pfam Protein phosphatase 2C 393 639 IPR001932 -
Bva13g02537 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Bva13g02537 656 SMART PP2C_4 379 644 IPR001932 -
Bva13g02537 656 CDD PP2Cc 389 646 IPR001932 -
Bva13g02537 656 ProSiteProfiles Protein kinase domain profile. 30 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02537 656 Pfam Protein kinase domain 30 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02537 656 PANTHER - 1 656 - -
Bva13g02537 656 PANTHER PROTEIN PHOSPHATASE 2C 1 656 IPR015655 GO:0004722|GO:0006470
Bva13g02537 656 Gene3D Transferase(Phosphotransferase) domain 1 20 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02537 Bva-Chr13 19013443 19019453 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02537 99 656 PP2C-type Phosphatase Gene Family AT2G40860 67.558 0.0 785
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Bva13g02537 Pkinase 9.3e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02537 13 19013443 19019453 Bva13g02537 13 19013443 19019453 ECH