Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02533 atggaaggaGAAGGATTTTTTCAGAAAAGCAAGCCTTACATAGCCATGATTTCTCTCCAGTTTGGTTATGCTGGAATGAATATAATCACAAAGGTTTCCCTCAACAGAGGGATGAGCCATTATGTGCTTGTTGTATATAGGCATGCTTTTGCTACAGCAGCAATTGCTCCCTTCGCTCTTGTCCTCGAGAGAAAAGTGAGACCCAAGATTACTTTCCTCATGTTCATGCAAATCTTTGTGTTGGGTCTCCTCGGACCTGTGATTGATCAGAACCTATACTATGCTGGGTTGAAATTCACTTCGCCAACCTACGCATGTGCTTTAAGCAACATGCTCCCGGCAATGACGTTTGTGATGGCAGTTATTTGCAGAATGGAGAAGGTGGACATGAAAAAAGTTAGATGCATAGCGAAGGTGATTGGAACGGTAGTAACAGTTGCGGGGGCTATGTTAATGACATTGTACAAAGGAGAAGTCATCAACTTTTTCTGGTCTCAGTACATGCATCAGCCTAGAAATTACGCTCCTGCCGCCGGCACCGCTGGTTCCGAGGACAGAGACTGGGTTAAGGGTTCCATTTTTCTCATCATTGCTACATTGGCTTGGGCTTCTTTCTTTATCCTTCAGGCAGTGACATTGAAGAGATACTCAGCTCAGCTCTCGCTCACAGCACTGGTGTGTTTTCTGGGTACTCTGCAGTCAACTGCAGTGGCCTTTGTGGTGGAACACAATCCCTCTGTTTGGTCCATTGGTTGGGACATGAATCTACTGGCAGCTGCCTATGCTGGTATTGTATCGTCAGGCATTGCCTACTATGTTCAAGGGATTGtgatgaagaaaagagggCCTGTGTTCGTTACTGCTTTCAGCCCCTTGATGATGGTCATCGTTGCCATCATGGGCTCTTTCATCCTCGCTGAAAAAATCTATCTTGGAGgAGTGGTTGGGGCAATACTGATTGTAATGGGTCTTTACTCGGTTCTGTGGGGTAAATACAAGGagtataaagagaaagaagcagaGTTAATTGCAGAGGCAACTAAGTGCTGCATAGAGAATGGGAGAATGGCAACTGTGATGGAAGTTATCGAAGAAAATGACATTGAAATGCAAAAAAGTGAAGCTGGCAAGGAATCAAGCACTTCAGTTTGCAATCACCATTA 1163 0.4308 MEGEGFFQKSKPYIAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFALVLERKVRPKITFLMFMQIFVLGLLGPVIDQNLYYAGLKFTSPTYACALSNMLPAMTFVMAVICRMEKVDMKKVRCIAKVIGTVVTVAGAMLMTLYKGEVINFFWSQYMHQPRNYAPAAGTAGSEDRDWVKGSIFLIIATLAWASFFILQAVTLKRYSAQLSLTALVCFLGTLQSTAVAFVVEHNPSVWSIGWDMNLLAAAYAGIVSSGIAYYVQGIVMKKRGPVFVTAFSPLMMVIVAIMGSFILAEKIYLGGVVGAILIVMGLYSVLWGKYKEYKEKEAELIAEATKCCIENGRMATVMEVIEENDIEMQKSEAGKESSTSVCNHH 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02533 387 PANTHER WAT1-RELATED PROTEIN 8 363 IPR030184 GO:0016021|GO:0022857
Bva13g02533 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 332 - -
Bva13g02533 387 Pfam EamA-like transporter family 190 328 IPR000620 GO:0016020|GO:0016021
Bva13g02533 387 Pfam EamA-like transporter family 12 153 IPR000620 GO:0016020|GO:0016021
Bva13g02533 387 PANTHER WAT1-RELATED PROTEIN 8 363 - -
Bva13g02533 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02533 Bva-Chr13 18995700 18997697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02533 4 383 Nodulin-like Gene Family AT5G07050 65.274 8.37e-178 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02533 - - gmx:100793545 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02533 13 18995700 18997697 Bva13g02533 13 18995700 18997697 ECH