Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02528 ATGAGGGAGGATGACTCTAATTGGTTTTCGAGATGGGAAGAGGAGCTTCCTTCCCCTGGGGAACTCATGCCCCTCTCCCAAACCCTAATCACTCCTGATCTTGCTTTGGCTTTTGATATCCGAAACCCTCACAGTAATAGTCCACAACAAATCCCGCAACCGCCACCTCCTTCCAATCCCTTGCCTTCTCCTGGCAACCCCAACCAACCCAACTCAGCTGAATTTGCAGATTCCGCCGAGTTGGGTTCTGGGACTGGTGGTGAGGAACCCGCGCGCACCCTCAAGCGCCCTCGCCTTGTTTGGACTCCACAACTTCACAAAAGGTTTGTCGATGCTGTGGCACATCTGGGGATCAAAAATGCTGTGCCCAAGACCATAATGCAGCTCATGAGTGTCGATGGGTTGACCAGGGAAAACGTGGCCAGTCATCTGCAAAAATACCGGCTTTATCTCAAGCGCATGCAAGGACTATCCGGCGGAAGTGGTGGTGGTAGCGGTGGTGCTGGAGGTGGATTGGCTGCTAGCGCAGATCCTGCCACTGAACATTTATTTGCGAGTTCACCTGTTCCGCCTCATTTCTTGCATCCAGCGCGGCCCAATTCAGACCATTTCTTGCCGTATGTGCAAGTCCCGGCTCTGCAGCACCACCATCACCAGCAGCAGATGGCGGCTGCTGCAGCTGTTGCTGCCCATCCACAATTGCAGCCACAGTATCATAGACAGGTGGGACATTTTGGGTCGCCTCCAAATGGGCATTTTGAGCATCCGTTCCTCACTAGGCAGTCTCAGCCACATCATAGGATGGGAGCGTCGGTTCACAATCCAGTACCTGGTTATGTAGAGGATATGGAATCAGCTAACGCAGCAGGAGGGAGAAAGGTTCTTACTTTATTTCCAACTGGGGATGACTG 911 0.5291 MREDDSNWFSRWEEELPSPGELMPLSQTLITPDLALAFDIRNPHSNSPQQIPQPPPPSNPLPSPGNPNQPNSAEFADSAELGSGTGGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGSGGGSGGAGGGLAASADPATEHLFASSPVPPHFLHPARPNSDHFLPYVQVPALQHHHHQQQMAAAAAVAAHPQLQPQYHRQVGHFGSPPNGHFEHPFLTRQSQPHHRMGASVHNPVPGYVEDMESANAAGGRKVLTLFPTGDD 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02528 303 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 303 IPR044841 GO:0003700|GO:0006355
Bva13g02528 303 PANTHER HOMEODOMAIN-LIKE PROTEIN-RELATED 1 303 - -
Bva13g02528 303 Pfam Myb-like DNA-binding domain 100 148 IPR001005 -
Bva13g02528 303 MobiDBLite consensus disorder prediction 1 95 - -
Bva13g02528 303 SUPERFAMILY Homeodomain-like 93 153 IPR009057 -
Bva13g02528 303 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 101 152 IPR017930 -
Bva13g02528 303 MobiDBLite consensus disorder prediction 48 67 - -
Bva13g02528 303 Gene3D - 93 155 - -
Bva13g02528 303 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 97 149 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02528 Bva-Chr13 18964243 18966440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02528 1 303 G2-like Transcription Factor Family AT3G10760 60.286 2.18e-100 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva13g02528 Myb_DNA-binding 2.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02528 - - jre:108983410 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02528 13 18964243 18966440 Bva13g02528 13 18964243 18966440 ECH