Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02525 ATGGCTTCAAGACCCGTCGTACCGCAGCAGGCCGCCAGAGGTGAGGGAGTAGTTGGGGGAGGTAAGCAGCTGCAGAAGAATGGTGCAGCAGAGAGAAAAAATCGCAGAGCACTGGGTGATATTGGAAATCTGGTTACCGTTAAAGGAATAGAGGTCAAGCCTAACCGCCCCATCACGAGgaGCTTCTGTGCCCAACTACTTGCAAATGCTCAAGCTGCTGCAGTTGCTGAAAATAACAagaaaaaggCTTGTCCTAATGTGGCTGGAGCCGCTCCGGTTCTTGATGGGGTTGCAGCTGCTAAGAGACCTGTGGCACCAAAAGCAGCTGAGAAGAAAGTGATCGCTAAACCAAAGCCTGAGGAAGTTGTTATTGAAATTAGCCCAGACAAAAAGGACGTTAAGAAGGAGAAGTgtgcaaacaagaaaaaggaagaaggaaacTCCAGGAAGAAATCACATACTCTTACTTCAGTTCTCACAGCTAGAAGCAAGGCAGCATGTGGTATGACTAAAAAACCAAAGGAGCAAATTGTTGACATTGATGCAGCTGACGCTGGTAATGAGCTTGCTGCCGTAGAATATATTGAAGACATCTACAAGTTCTATAAGCTGGTGGAGCATGAAAGCCGCCCACATGACTATATGGACTCACAGCCTGAAATCAATGAAAGGATGAGAGCTATATTGGTTGATTGGCTGATGGATGTCCAGAGCAAGTTTGATCTTTCGCTTGAAACTCTTTATTTGACTATCAACATTATTGATCGGTTCCTTGCAATCAAGACTGTGCCAAGGAGGGAGCTGCAATTGGTTGGCATCAGTGCAATGCTGATAGCTTCCAAGTATGAAGAAATCTGGCCCCCCGAGGTCAATGACTTTGTGTGTCTCTCAGACAGAGCCTACACTCATGAACAGATTCTGGTGATGGAGAAAATCATACTGGGCAAGCTGGAATGGACATTGACTGTGCCTACACCTTATGTGTTCCTCGTTCGTTTCATCAAGGCATCAATTCCTGATCAGGAAttGGAAAACATGGTCCACTTTCTTTCGGAGCTGGGAATGATGCAATATGCAACCATTATGTATTGCCCATCAATGATTGCTGCCTCAGCTGTCTTTGCCGCTCGATGCACTCTGAATAAGAGCCCTGCTTGGAATGATACACTCAAGCTGCACACTGGTTTTTCAGAAGAACGACTGATGGATTGTGCTAGACTATTAGTGAGCTTCCACTCCATGGCTGGGCAGGGAAAGCTTCAGGTTCTGTACAGAAAATACTCAGATCCCAAGAGAGGGGCTGTTGCTCTGCTTCCACCGGCTAGGAATCTCCTTCGTGGTTCTGCTGCTGGACAAGgcaatta 1364 0.4523 MASRPVVPQQAARGEGVVGGGKQLQKNGAAERKNRRALGDIGNLVTVKGIEVKPNRPITRSFCAQLLANAQAAAVAENNKKKACPNVAGAAPVLDGVAAAKRPVAPKAAEKKVIAKPKPEEVVIEISPDKKDVKKEKCANKKKEEGNSRKKSHTLTSVLTARSKAACGMTKKPKEQIVDIDAADAGNELAAVEYIEDIYKFYKLVEHESRPHDYMDSQPEINERMRAILVDWLMDVQSKFDLSLETLYLTINIIDRFLAIKTVPRRELQLVGISAMLIASKYEEIWPPEVNDFVCLSDRAYTHEQILVMEKIILGKLEWTLTVPTPYVFLVRFIKASIPDQELENMVHFLSELGMMQYATIMYCPSMIAASAVFAARCTLNKSPAWNDTLKLHTGFSEERLMDCARLLVSFHSMAGQGKLQVLYRKYSDPKRGAVALLPPARNLLRGSAAGQGN 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02525 454 SUPERFAMILY Cyclin-like 323 441 IPR036915 -
Bva13g02525 454 ProSitePatterns Cyclins signature. 226 257 IPR006671 -
Bva13g02525 454 PANTHER G2/MITOTIC-SPECIFIC CYCLIN S13-6 22 447 - -
Bva13g02525 454 Pfam Cyclin, C-terminal domain 324 440 IPR004367 -
Bva13g02525 454 MobiDBLite consensus disorder prediction 133 151 - -
Bva13g02525 454 CDD CYCLIN 225 314 IPR013763 -
Bva13g02525 454 PIRSF Cyclin_A_B_D_E 1 452 IPR039361 -
Bva13g02525 454 SUPERFAMILY Cyclin-like 187 321 IPR036915 -
Bva13g02525 454 SMART cyclin_7 231 315 IPR013763 -
Bva13g02525 454 SMART cyclin_7 328 410 IPR013763 -
Bva13g02525 454 SMART Cyclin_C_2 324 441 IPR004367 -
Bva13g02525 454 Pfam Cyclin, N-terminal domain 197 321 IPR006671 -
Bva13g02525 454 Gene3D - 211 322 - -
Bva13g02525 454 MobiDBLite consensus disorder prediction 1 34 - -
Bva13g02525 454 PANTHER CYCLINS 22 447 IPR039361 -
Bva13g02525 454 MobiDBLite consensus disorder prediction 133 154 - -
Bva13g02525 454 CDD CYCLIN 322 409 IPR013763 -
Bva13g02525 454 Gene3D - 197 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02525 Bva-Chr13 18948513 18951232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02525 1 402 Core Cell Cycle Gene Families AT3G11520 58.477 3.35e-151 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02525 K21777 - gmx:547919 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02525 13 18948513 18951232 Bva13g02525 13 18948513 18951232 ECH