Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02517 ATGTTTTCCCAACATTTCCATTCATGGGTGTTTATAGCCATAACCTCTGCTATTTTACTGCTCATATGCTCACCGGTGAGGTCATTTCCAGAAGCTGACAAGGTGAAAACTTTGCCTGGCCAACCACCTGTTACTTTCCAACAATTTGCTGGCTATGTAACTGTAGACGAGAGGAAACAGAGATCTCTGTTTTACTACTTTGTTGAAGCAGAAACCAACGCTGCTTCGAAGCCCATCGTTCTCTGGCTTAATGGAGGACCTGGCTGCAGTTCTATTGGAGTTGGAGCTTTCACCGAAAATGGACCCTTTACTACAGCTTACGGAAAATCCATTgtcaaaaataactttagtTGGAATAAAGAGGCCAACATTTTATATCTAGATTCACCAGCAGGTGTTGGGTTCTCTTATTCTCTCAACAACTCATTTTACCGCACCTTAAATGATGAGGTCACAGCACGAGACAGTTTTGTCTTCCTGCAGCGCTGGTTTGACAAATTCCCAGAGTACAAAAATAAGGACTTCTATATAACGGGAGAGAGCTATGCtgGTCATTATGTCCCTCAGCTTGCAGAACTGATTGTTAAGAGTAAAAGTAAAGTTCAGTTCAATCTAAAGGGGATAGCAaTTGGAAACCCTCTCCTGGATTTGGACATTGATGTAAATTCAGTCGAGGAATATTACTGGTCCCATGGCATTATTTCTGAGTCTGCTTATAAAACTAGGATATCACTTTGTAACTCATCTCGACTGAACAGAGAATTCATTGGTGGTCAAATCTCCCTCGATTGTGTTCTTGCAATCAATCGAGTGGCCGACGAATATTCTTTCATTAGCGCCATTGATCCATACTATATAATCGGCGATAAATGTCTGTCCTACAATCTATCTCAGGCAAATTTCCTCAGTGAACTGTTAAATTTAAGGTTGTCCAAATTCATACAGGCTCAAAATCTGCAACAGACCAATGAACTTGACCAGCAACTCGATAGCTGTAATCAACAGAATTCAGAGTTGTATCTGAACAGGAAAGATGTGCAGAAAGCTCTGCATGCACAACTCTTGGGAGCCAAAACTTACCGTTTATGCAGCtcGAATGTGGTAAGCTACTATGAAGCATCAGACAGATTGACACCAACAATTGATGTTGTGGGCTTCCTCGTAAGATCAGGACTTCGAGTAATTGTTTACAGTGGGGATCTAGACGCCGTCATTCCATTCATTGGCAGTCGAAGATTGGTAGATGGACTAGCAAAGAAACTGCGCCTCAAAACAACTGTGCCTTACAGTGCTTGGTTTGTAGGGAAACagGTTGGAGGTTGGACACAAGTTTACGGAGATAAGCTTACGTATGCTACCATTAGAGGAGCTTCACATGGTGCTCCAACGACTCAACCCGAGAGGTCCTTTGTGTTGTTTACTTCGTTTCTTAATGGGAAACCACTCCCTGAAGCATG 1457 0.418 MFSQHFHSWVFIAITSAILLLICSPVRSFPEADKVKTLPGQPPVTFQQFAGYVTVDERKQRSLFYYFVEAETNAASKPIVLWLNGGPGCSSIGVGAFTENGPFTTAYGKSIVKNNFSWNKEANILYLDSPAGVGFSYSLNNSFYRTLNDEVTARDSFVFLQRWFDKFPEYKNKDFYITGESYAGHYVPQLAELIVKSKSKVQFNLKGIAIGNPLLDLDIDVNSVEEYYWSHGIISESAYKTRISLCNSSRLNREFIGGQISLDCVLAINRVADEYSFISAIDPYYIIGDKCLSYNLSQANFLSELLNLRLSKFIQAQNLQQTNELDQQLDSCNQQNSELYLNRKDVQKALHAQLLGAKTYRLCSSNVVSYYEASDRLTPTIDVVGFLVRSGLRVIVYSGDLDAVIPFIGSRRLVDGLAKKLRLKTTVPYSAWFVGKQVGGWTQVYGDKLTYATIRGASHGAPTTQPERSFVLFTSFLNGKPLPEA 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02517 485 Pfam Serine carboxypeptidase 40 479 IPR001563 GO:0004185|GO:0006508
Bva13g02517 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185|GO:0006508
Bva13g02517 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 449 462 IPR001563 GO:0004185|GO:0006508
Bva13g02517 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Bva13g02517 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Bva13g02517 485 SUPERFAMILY alpha/beta-Hydrolases 26 483 IPR029058 -
Bva13g02517 485 Gene3D - 332 368 - -
Bva13g02517 485 PANTHER CARBOXYPEPTIDASE 12 484 - -
Bva13g02517 485 ProSitePatterns Serine carboxypeptidases, histidine active site. 449 466 IPR033124 GO:0004185
Bva13g02517 485 ProSitePatterns Serine carboxypeptidases, serine active site. 177 184 IPR018202 GO:0004185
Bva13g02517 485 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 12 484 IPR001563 GO:0004185|GO:0006508
Bva13g02517 485 Gene3D - 381 479 - -
Bva13g02517 485 Gene3D alpha/beta hydrolase 30 293 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02517 Bva-Chr13 18893646 18896248 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02517 337 482 Calmodulin-binding Proteins AT2G22960 28.082 1.89e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02517 K16297 - gmx:100819443 686.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02517 13 18893646 18896248 Bva13g02517 13 18893646 18896248 ECH