Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02516 ATGGCATATCAGTTATGGATCATCGTGGCCATAATGTGTGCAAGTTTTCTGCATTTATGCAGCTCTGACAGGATCCACAGTTTTCCTGGCCAACCAAATGTTACTCTTAGCTTTCAACAATATGGGGGCTACATATTCGTAGATGACAAGCAACATAGAGGTCTGTTTTATTACTTTGTCGAAGCAGAAACTGACCCTGCTTCAAAGCCTCTCATTCTCTGGCTAAATGGagGACCAGGTTGTTCCTCTGTAGGAATTGGAGCATTCACAGAACATGGCCCCTTTGTCACCAATTATGGCCAGTCTATTGTGAAAAATAACTACAGCTGGAATAGAGAGGCCAATATTCTGTACTTGGAATCACCGGCGGGGGTTGGATTCTCTTATTCTACTGATGACTCATTTTACAACACTCTCAATGATGAAATCACAGCCCAGGACAACATGGTATTTCTGAAACGCTGGTTTTATAAATATCCAGCGTACAAGAACAGTGATTTCTACATAATGGGAGAGAGTTATGGAGGTCACTACGTTCCTCAACTTGCAGAGCTAATTATTAAGAGTAAAGTGAACATCAATCTAAAGGGGATAGGAATAGGAAACCCTCTTCTGGAGTATGAAACTGATTTCAATGCAGTGGATGAATACTACTGGTCACACGGCATGTTATCTGATTATGCTTATGAACTTCGTAGTTCAGTTTGtaacaaatcaaaatcttcCAGACAAAATTTAAGGGGCTGTTTCTCTCCGGATTGTGTTGCTGTACTTACTGAGATCAATGATGAATATTCTGAGTTGGATTCCTTAGATCTATATTATGTGATTGGTGATAAATGTCTGTCGTACAATTTAACACAAGCAACATTCCTCACTCATAGGCTAAGGTCAAGGATGTCGCAAATTTTAAGGTCTCTACATTTGCAAAAAGACAAAGACACATACCAGGGACTTGATGAGTGTCCAGAGAAAAATGCAGAGATGTACTTAAACAGAGAAGATGTGCAGAGGGCCCTGCATGCCCGGCTAGTGGGAGCCAAACAATATCGTCTATGCAGCCCTGTAGTGTGGGATAAATATGcacaagaagatgaagaaataccaaCCATCAAAGTTGTTAGCAATCTTGTGAAGTCTGGCCTTCGAGCCTTTGTTTACAGCGGAGACCAAGATTCTGTGGTTCCATTTATTGGTACTCGAAGATTGGTGGATAGGCTAGCAAAGGAAATAGGACTGAAAACAAGCGTGCCATACAGTGCTTGGTTTGTGGGAAAACAGGTGGGAGGATGGACACAAGTCTATGGTGATCGTCTCACCTATGCTACAATAAGAGGGGCCTCGCACAGCACCCCGACTACTCAACCAAAGAGATCTTTTGTCTTGTTCAAAGCATTTCTTCTTGGGAAACCACTCCCTAAATCATCTAAACTGTA 1436 0.4081 MAYQLWIIVAIMCASFLHLCSSDRIHSFPGQPNVTLSFQQYGGYIFVDDKQHRGLFYYFVEAETDPASKPLILWLNGGPGCSSVGIGAFTEHGPFVTNYGQSIVKNNYSWNREANILYLESPAGVGFSYSTDDSFYNTLNDEITAQDNMVFLKRWFYKYPAYKNSDFYIMGESYGGHYVPQLAELIIKSKVNINLKGIGIGNPLLEYETDFNAVDEYYWSHGMLSDYAYELRSSVCNKSKSSRQNLRGCFSPDCVAVLTEINDEYSELDSLDLYYVIGDKCLSYNLTQATFLTHRLRSRMSQILRSLHLQKDKDTYQGLDECPEKNAEMYLNREDVQRALHARLVGAKQYRLCSPVVWDKYAQEDEEIPTIKVVSNLVKSGLRAFVYSGDQDSVVPFIGTRRLVDRLAKEIGLKTSVPYSAWFVGKQVGGWTQVYGDRLTYATIRGASHSTPTTQPKRSFVLFKAFLLGKPLPKSSKL 478
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02516 478 ProSitePatterns Serine carboxypeptidases, serine active site. 169 176 IPR018202 GO:0004185
Bva13g02516 478 SUPERFAMILY alpha/beta-Hydrolases 25 473 IPR029058 -
Bva13g02516 478 Gene3D alpha/beta hydrolase 18 474 IPR029058 -
Bva13g02516 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 106 118 IPR001563 GO:0004185|GO:0006508
Bva13g02516 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 129 IPR001563 GO:0004185|GO:0006508
Bva13g02516 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 180 IPR001563 GO:0004185|GO:0006508
Bva13g02516 478 PRINTS Carboxypeptidase C serine protease (S10) family signature 439 452 IPR001563 GO:0004185|GO:0006508
Bva13g02516 478 Pfam Serine carboxypeptidase 34 467 IPR001563 GO:0004185|GO:0006508
Bva13g02516 478 PANTHER CARBOXYPEPTIDASE 18 474 - -
Bva13g02516 478 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 18 474 IPR001563 GO:0004185|GO:0006508
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bva13g02516 Bva-Chr13 18890104 18892349 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02516 327 472 Calmodulin-binding Proteins AT2G22960 30.822 2.35e-17 78.2
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02516 13 18890104 18892349 Bva13g02516 13 18890104 18892349 ECH