Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02509 ATGCAGGAGATGGAGAACTCGGAGCTGTACCAATTCTTCGCCGGAAACGCTTCCTTCTTCAACGCCACTACTGCACCCTGCTATAGCTATGGTTTGCCCGCAACCACGCCGATGCAGAGTTTCTGCAGTAGTTCCTCTTATTACCCCTTGGAGGTCTCCGAAATTACTGATACACCACAGCAGGATAGAGCCCTCGCCGCTTTGAAGAACCACAAAGAGGCCGAGAAGAGGAGGAGGGAGAGAATCAATTCCCACCTCGATAAGCTTCGCACTCTTCTCCCCTGTAATTCTAAGacAGACAAGGCTTCTCTTCTTGCAAAGGTTGTCCAAAGAGTGAAAGAGCTCAAACAACAAACCTCAGAAATAACCGAACTAGAAACCGTTCCTTCAGAGACCGACGAAATCACAGTCCTCTCAACCACCGATAATGGCAGCGAATACGGCGGTGACCAAAGGCTGATATTCAAAGCCTCGTTGTGCTGCGAAGACCGTTCCGATCTCATCCCGGACCTAATCGAGATCCTGAAATCCCTACATCTGAAAACCCTGAAAGCAGAAATGGCAACACTCGGAGGAAGAACCCGAAACGTCCTCATCGTCGCAGCCGACAAGGACCACAGCATAGAGTCGATCCACTTCCTGCAGAACGCATTGAAATCCTTGCTAGAACGTTCTAATAATTCCAGCGAAAGATCCAAACGGCGCCGCGTTTTAGACCGTAAATTGATGTCTTA 734 0.4918 MQEMENSELYQFFAGNASFFNATTAPCYSYGLPATTPMQSFCSSSSYYPLEVSEITDTPQQDRALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVQRVKELKQQTSEITELETVPSETDEITVLSTTDNGSEYGGDQRLIFKASLCCEDRSDLIPDLIEILKSLHLKTLKAEMATLGGRTRNVLIVAADKDHSIESIHFLQNALKSLLERSNNSSERSKRRRVLDRKLMS 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02509 244 MobiDBLite consensus disorder prediction 226 244 - -
Bva13g02509 244 CDD bHLH_AtAIG1_like 61 137 - -
Bva13g02509 244 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 66 115 IPR011598 GO:0046983
Bva13g02509 244 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 70 126 IPR036638 GO:0046983
Bva13g02509 244 Pfam Helix-loop-helix DNA-binding domain 70 115 IPR011598 GO:0046983
Bva13g02509 244 Gene3D - 61 127 IPR036638 GO:0046983
Bva13g02509 244 PANTHER TRANSCRIPTION FACTOR BHLH30 1 243 IPR045847 GO:0003700|GO:0006355
Bva13g02509 244 PANTHER TRANSCRIPTION FACTOR BHLH106-RELATED 1 243 - -
Bva13g02509 244 SMART finulus 72 121 IPR011598 GO:0046983
Bva13g02509 244 MobiDBLite consensus disorder prediction 225 244 - -
Bva13g02509 244 CDD ACT_UUR-ACR-like 158 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02509 Bva-Chr13 18855803 18857389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02509 3 228 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 63.090 4.36e-87 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva13g02509 HLH 1.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02509 - K22484 qsu:111998080 333.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02090 04 20445597 20447249 Bva13g02509 13 18855803 18857389 BWGD
Bva13g02509 13 18855803 18857389 Bva13g02509 13 18855803 18857389 ECH