Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02508 ATGGGACTCTGTCATGGAAAACCTATCGAAATCTCACAAACCCAAGGTGAAAACCCAGTATTTCCCGGTGATAAAGACGGGTTGCCGAGTTCTAACACAGGCAAATCCTCAAACTTCCCATTTTACAGCCCAAGTCCCCTACCGAGTCTCTTCAAATACTCGCCAGCAAACTCCAGTGTGAGCTCAACACCTTTGCGCTTTTTCAAGCGCCCGTTTCCTCCTCCCTCCCCGGCCAAGCACATACGGGCACTGCTAGCTCGACGGCATGGTTCAGTGAAGCCTAATGAAGCCTCAATTCCTGAAGGCCGTGAATGTGAGGTTGGATTGGACAAACATTTCGGTTTTTCAAAGCAGTTTGTGGCTCATTATGACCTTGGAGAAGAGGTAGGGCGTGGGCATTTTGGGTATACTTGCTCAGCCAAGGGAAGGAAGGGAAGCTTGAAGGGGCAGGATGTGGCCGTCAAAATCATTCCAAAATCGAAGATGACAACAGCTATTGCTGTCGAGGATATACGAAGAGAGGTGAAAATGTTGCGGGCTTTAACAGGACATAAGAACCTGGTGCAGTTCTATGAAGCCTATGAGGATGATGACAATGTTTATGTAGTTATGGAGTTATGCAAGGGCGGTGAACTGCTAGATAGGATACTTTCCAGGGGTGGTAAGTATTCTGAAGAGGATGCCAAGGTCGTTATGATTCAAATATTAAGTGTGGTGGCCTTCTGTCATCTCCAGGGTGTGGTTCATCGTGATCTCAAACCGGAGaattttctttttacttctaAGGATGAAAATTCCACGTTGAAAGCCATTGATTTTGGACTATCAGACTATGTAAAGCCAGATGAAAGATTGAATGACATTGTCGGAAGTGCATATTATGTAGCTCCTGAAGTTTTACACAGATCTTACGGGACAGAAGCTGACATGTGGAGCATTGGTGTAATTGCTTATATCCTTTTATGTGGAAGCCGACCCTTTTGGGCCCGGACAGAATCTGGTATATTTCGAGCTGTCTTGAAGGCAGATCCAAATTTTGATGAAGCTCCTTGGCCTTCTTTATCTCCCGATGCAGTAGATTTTGTAAAGAGGCTGTTGAATAAGGATTACCGTAAAAGATTAACTGCAGCTCAGGCTCTTCGTCATCCGTGGCTGGTGAATCGTCAGGATGATATAAAGATACCTTTGGATATGATAATTCACAAGCTTGTGAAAGCTTATATATGTTCATCGTCTTTACGTAAATCAGCATTAGGGGCTTTGGCAAAGACATTAACAGTGGCTCAGCTAGCTTATCTCAGAGAACAATTTACACTGTTAGGGCCAAACAAAAGCGGATTTATCTCTATGCAGAACTTTAAGACGGCtgttttgagaagctccacTGACGCATCAAAGGACTCACGGGTCTCAGATTACGTTAACATGTTTAGCTCCATCCAATATAGGAAATTAAACTTTGAGGAATTTTGTGCTGCTGCTATAAGTGTGCACCAGCTAGAGGGGATGGCCAGCTGGGAGCATCATGCAACACGTGCCTATGAGCTGTTTGAAAAGGATGGAAATAGACCAATTATGATCGAAGAGCTTGCCTCGGAACTTGGGCTTAGCCTATCAGTACCTGTTCATGTAGTGCTCCAAGATTGGATCAGACACTCAGATGGGAAGCTTAGTTTCTTGGGGTTTGTCAGACTTCTGCATGGTGTTTCTTCCCGCACTTTTCAGAAGGCTTG 1733 0.4397 MGLCHGKPIEISQTQGENPVFPGDKDGLPSSNTGKSSNFPFYSPSPLPSLFKYSPANSSVSSTPLRFFKRPFPPPSPAKHIRALLARRHGSVKPNEASIPEGRECEVGLDKHFGFSKQFVAHYDLGEEVGRGHFGYTCSAKGRKGSLKGQDVAVKIIPKSKMTTAIAVEDIRREVKMLRALTGHKNLVQFYEAYEDDDNVYVVMELCKGGELLDRILSRGGKYSEEDAKVVMIQILSVVAFCHLQGVVHRDLKPENFLFTSKDENSTLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPNFDEAPWPSLSPDAVDFVKRLLNKDYRKRLTAAQALRHPWLVNRQDDIKIPLDMIIHKLVKAYICSSSLRKSALGALAKTLTVAQLAYLREQFTLLGPNKSGFISMQNFKTAVLRSSTDASKDSRVSDYVNMFSSIQYRKLNFEEFCAAAISVHQLEGMASWEHHATRAYELFEKDGNRPIMIEELASELGLSLSVPVHVVLQDWIRHSDGKLSFLGFVRLLHGVSSRTFQKA 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02508 577 CDD STKc_CAMK 122 384 - -
Bva13g02508 577 Gene3D - 407 568 - -
Bva13g02508 577 ProSiteProfiles Protein kinase domain profile. 123 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02508 577 PANTHER CDPK-RELATED KINASE 1 26 572 - -
Bva13g02508 577 Pfam Protein kinase domain 123 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02508 577 PANTHER SERINE/THREONINE-PROTEIN KINASE 26 572 - -
Bva13g02508 577 SUPERFAMILY EF-hand 415 568 IPR011992 -
Bva13g02508 577 ProSitePatterns Protein kinases ATP-binding region signature. 129 155 IPR017441 GO:0005524
Bva13g02508 577 ProSiteProfiles EF-hand calcium-binding domain profile. 428 463 IPR002048 GO:0005509
Bva13g02508 577 Gene3D Phosphorylase Kinase; domain 1 116 212 - -
Bva13g02508 577 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Bva13g02508 577 SMART serkin_6 123 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva13g02508 577 Gene3D Transferase(Phosphotransferase) domain 1 213 406 - -
Bva13g02508 577 SUPERFAMILY Protein kinase-like (PK-like) 121 407 IPR011009 -
Bva13g02508 577 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02508 Bva-Chr13 18842034 18847290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02508 1 575 EF-hand Containing Proteins AT3G50530 66.244 0.0 839
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bva13g02508 Pkinase 5.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02508 - - jre:108986071 995.342
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02508 13 18842034 18847290 Bva13g02508 13 18842034 18847290 ECH