Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02506 ATGTGGATGACACGTAATGGAGAATGGACAAAATATTCTGTGCCACCCCACATGAAGTGTCACACCCAAGGTGACATGAATGTTGATGATCCAGATGCAGATGCAGTTGCAATGAAGTGGAAAGATGAGTGCTTTCGCGGTAGCAGAGAAGGAAGGGGACGAGTGGAAGTGAGAGCTAACCCCGTCGCCGAATTTCTCCGATTCTCCAGggagaaaatttttaatccaTTGTTTTTCAGTTGTCATGCCTTACCTTGTCCGAGAGAATTTGTTTATTGCTCAGCTTCAATATCATTCTTTTCTGAATGGCGTAAAGGCCTAACAATCCCCACAAAGGAAATCAAGAAGGTTTATGTTGGCCGTAGTGATGGCACTGCTCATGATGATAATTTGGGAGACGGGTCAAGGAGTCCCTTGTCACCAGAGAAGCTTCTGTACTCATTGGAACATGCGGGAAAAGATTTGAAATTGGTGAGGATGGCTGTGCCTTTGAGGGATACAGAAAACGAAGATTTGTTGGATTATCTGGAGGTCTGCCTAGATTTCATTGATCAGAGTAGAAAAGAAGGATCTATTTTGGTTCACTGCTTTGCTGGAGTATCTAGAAGTGCAGCAATCGTTACAGCATATTTGATGAGAACTGAACATCTATCACAAGAAGATGCACTTGGTTCATTAAGGCAGAGCTGTGAGTCTGTTTGCCCCAATGATGGTTTTCTAGAGCAGttaaaaaTGTTTGAAGAGATGGGTTTCAAGGTAGATCATTCTAGCCCCATATACAAGCGCTTTCGTCTGAAAATACTTgGTGAGAATTATAACTCAGGGTTGGGATTCGACAGTTCTAAACTGGGTGCAGATCCTGGTATGCCTGTTGAGGTTTCTGCTGAGGTGGAAGGAGCTCCAAAAGTAGGAAATAATCGCACTCCTACATATCGCTGTAAAAAGTGTCGACGGGTGGTTGCATTGCAGGAGCATGTTGTAGATCATATTCCAGGTGAAGGCGAGACATCCTTTGATTGGCACAAGCGAAGAAGTGGCAACCCTTTTAGCAAGCCTAATGAATCCGAGTGTTCATCCATATTTATTGAGCCTCTGCGATGGATGAAAGCTGTTGAGGAAGGTGCACTGGAGGGAAAGTTGTCCTGCGCTCATTGCGAAGCCCGTTTGGGGTACTTCAATTGGTCAGGTATACAGTGTAGTTGTGGAAGCTGGATAACCCCCGCTTTTCAGCTCCACAAAAGCCGGGTGGATCGGAAGGTCGGCCCTGAGTTGGGTTTCTCCATATGTAGAATAAGAGACATACTACAGGTTGAACCCCCCATTGGAGATACAGGAACGTCTTCGTTGAAGTG 1352 0.4453 MWMTRNGEWTKYSVPPHMKCHTQGDMNVDDPDADAVAMKWKDECFRGSREGRGRVEVRANPVAEFLRFSREKIFNPLFFSCHALPCPREFVYCSASISFFSEWRKGLTIPTKEIKKVYVGRSDGTAHDDNLGDGSRSPLSPEKLLYSLEHAGKDLKLVRMAVPLRDTENEDLLDYLEVCLDFIDQSRKEGSILVHCFAGVSRSAAIVTAYLMRTEHLSQEDALGSLRQSCESVCPNDGFLEQLKMFEEMGFKVDHSSPIYKRFRLKILGENYNSGLGFDSSKLGADPGMPVEVSAEVEGAPKVGNNRTPTYRCKKCRRVVALQEHVVDHIPGEGETSFDWHKRRSGNPFSKPNESECSSIFIEPLRWMKAVEEGALEGKLSCAHCEARLGYFNWSGIQCSCGSWITPAFQLHKSRVDRKVGPELGFSICRIRDILQVEPPIGDTGTSSLK 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02506 450 SMART dsp_5 69 249 IPR020422 GO:0006470|GO:0008138
Bva13g02506 450 ProSitePatterns Tyrosine specific protein phosphatases active site. 194 204 IPR016130 GO:0016311|GO:0016791
Bva13g02506 450 Pfam Dual specificity phosphatase, catalytic domain 156 248 IPR000340 GO:0008138|GO:0016311
Bva13g02506 450 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 161 263 IPR029021 -
Bva13g02506 450 ProSiteProfiles Dual specificity protein phosphatase domain profile. 109 252 IPR020422 GO:0006470|GO:0008138
Bva13g02506 450 Gene3D Protein tyrosine phosphatase superfamily 126 269 IPR029021 -
Bva13g02506 450 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 173 228 IPR000387 GO:0016311|GO:0016791
Bva13g02506 450 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 FAMILY MEMBER 138 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02506 Bva-Chr13 18829248 18834431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02506 157 248 Protein tyrosine phosphatase (PTP) family AT3G06110 38.710 5.36e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02506 K14819 - zju:107403964 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02506 13 18829248 18834431 Bva13g02506 13 18829248 18834431 ECH