Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02492 ATGGCTAGCCACACCAGCGATAAAAGTTCCGAGTTTTTCTTGGATCATAACGATGAGGATACTGAACAGGACATTGAAGGTAGCAAGTCTGACAGTGAGAGTAGTAGCGACGATGAGCGACATCATGATCAACCACTTGACACTTTCCGTTCGCAGCAATGGCCCCAAAGTTACAGGGAAACTACAGATTCTCTCACAATTGCTGCATCACCAAGTCTTAATGCGGCATTTCTACGAACGCCAAGTATGATATATTCAAGCTTCATGGGTCGTTCGAAAAGTAATTTAGACCTAGATCCAAAGGCTCCTCTCATGCCTGGTTTGGGAAGCACTAACGAGATGCAGATGGATGGATGGGGTGGGATCTCAAGAGCACTATCATCAATGTATGAGCAACCTTCAATGCATAAGCAACTTACTGGAGAATTGCCCCTTGGTCAAGGATGTACCTTAACCCAAACTGTTTTTAATGGGATTAATGTGTTGGCTGGTGTTGGCCTTTTGTCTACACCTAGTACAGTGAACCAAGCTGGGTGGGTCGGTTTGGTGGTGCTGCTCCTTTTTGCACTTATATGTTGTTATACGGCCACACTTATGAAGCGCTGCTTTGAAAGCAGAGAAGGAATCATGAGCTACCCAGATATAGGAGAAGCTGCATTTGGAAGATATGGCCGAATTATTATATCAATCATTTTGTACACTGAATTATATTCATATTGTGTGGAATTTATCATCTTGGAAGGAGACAACCTTACTAGACTGTTTCCTGGAACATCTCTGGATTGGGGCGCTCTCCATTTAGACTCCATGCACTTGTTCGGAATTTTGACTGCACTTATTATTCTCCCAACTGTTTGGTTGAAGGATCTTCGTGTTATCTCCTATCTTTCAGCTGGAGGGGTCCTTGTAACACTTCTGATCATTCTCTCTGTATTCTTTGTTGGGACGGTAGAAGGTGTTGGATTCTACCACACTGGTCAATTCCTGAATTTGGGTGGCATCCCATATGCTATTGGTGTCTATGGGTTCTGCTATTCAGGACATTCAGTTTTTCCAAATATTTACCAGTCTATGGCTAACAAAAGACAATTTACAGCAGCAGTAGTAATATGTTTTGCTTTATGCTTTTTTATGTATGGAGGTATGGCAGTCATGGGATATCTCATGTTTGGTGAAGCTACTTTGTCccaaataacattaaatttgcCAAAACATAGTGTTGGTGCCCAAGTTGCATTGTGGACAACAGTGATTAATCCGTTCACTAAATATCCTTTTGGTCACATCTTACTTAACCTTGCTTGTTTTGTCTACAGTTTGTGCTGCCTTTCTGATTCCATTTTTCGGGCTCGTGATGGCTTTAATTGGTTCTCTTCTCAGTGTACTTGTGgCAGTTATAATGCCAGCTTTATGTTTCCTGAGAATTGTGGGGAAAAAAGCTACAAGGACACAGATTGTTCTGAGTGTCGCAATTGCTGCAATCGGAATCGTGAGTGGAGCCCTTGGGACATACTCTTCCGTGTCAAGAATTTTAAGGAGTTACTGAAACATGATCAGTCTTCTGAGTATTG 1571 0.4169 MASHTSDKSSEFFLDHNDEDTEQDIEGSKSDSESSSDDERHHDQPLDTFRSQQWPQSYRETTDSLTIAASPSLNAAFLRTPSMIYSSFMGRSKSNLDLDPKAPLMPGLGSTNEMQMDGWGGISRALSSMYEQPSMHKQLTGELPLGQGCTLTQTVFNGINVLAGVGLLSTPSTVNQAGWVGLVVLLLFALICCYTATLMKRCFESREGIMSYPDIGEAAFGRYGRIIISIILYTELYSYCVEFIILEGDNLTRLFPGTSLDWGALHLDSMHLFGILTALIILPTVWLKDLRVISYLSAGGVLVTLLIILSVFFVGTVEGVGFYHTGQFLNLGGIPYAIGVYGFCYSGHSVFPNIYQSMANKRQFTAAVVICFALCFFMYGGMAVMGYLMFGEATLSQITLNLPKHSVGAQVALWTTVINPFTKYPFGHILLNLACFVYSLCCLSDSIFRARDGFNWFSSQCTCGSYNASFMFPENCGEKSYKDTDCSECRNCCNRNREWSPWDILFRVKNFKELLKHDQSSEY 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02492 523 Pfam Transmembrane amino acid transporter protein 150 425 IPR013057 -
Bva13g02492 523 PANTHER AMINO ACID TRANSPORTER AVT1A 29 430 - -
Bva13g02492 523 MobiDBLite consensus disorder prediction 1 57 - -
Bva13g02492 523 PANTHER OS05G0424000 PROTEIN-RELATED 29 430 - -
Bva13g02492 523 MobiDBLite consensus disorder prediction 27 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02492 Bva-Chr13 18735964 18740111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02492 16 424 Amino Acid or Auxin Permease AAAP Family AT2G41190 58.065 3.27e-169 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02492 K15015 - mnt:21397095 555.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02492 13 18735964 18740111 Bva13g02492 13 18735964 18740111 ECH