Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02487 ATGTTAGCATTATCCCCACCTTTGTTCTCGACCACTGGATGGCTCTTGGAGTTGGAAGAGGCCATAAATCATAACCAGAACAACTTGTACAACGATACTGAGACATCTGATCACTACTCATTCCCTGAACAGCCACGGCCGGAGGTAGGACTTGAAAGGTCAACTCCGCCGTCCCCGGCGGCCACCGTGGTCAAGAAGCTTAACCACAATGCTAGTGAACGTGATCGCCGCAAGAAGATCAATTCCTTGTATTCCTCACTTCGCTCGCTGCTTCCAAAGGCAGATCAAATGaaaaaattaagcattCCGGGAATAATTTCACGAGTCCTAAAGTACGTACCGGACTTGCAGCAGGAAGTTGAAGGACTTGTTAAGAAAAAGGAGGACCTTGTAATGAAAATTTCTCGAAAAGGAGGTGTTGCGACCAAAGAATCTCAAAGGAAAATTGCCCTTCGCAACTCTTTCTTTGCAGTTTCAACTAGTAGGCTCAATGATTGTGAAGCTTTTATTCAGATTTCTTCTATTAAGGCCCATAAAACTCCATTATCAGAGGTGTTGCTGTGCTTAGAGAAAGAAGGACCTTTATTGCTAAatgcttcttcttttgagACCTTTGGAAGGAGAGGCTTCTATAACTTGCATTTCCAGGTGGAAAAATCTTACAAATTAGACTCTGATATCCTAAGTGAGAAGCTTATGTCAATATATGAGAAGAAGGAAACGATTAGCCCTAAATATCATGACCAAGCGATCTCAAGTGCTTCATCTATCTG 773 0.4153 MLALSPPLFSTTGWLLELEEAINHNQNNLYNDTETSDHYSFPEQPRPEVGLERSTPPSPAATVVKKLNHNASERDRRKKINSLYSSLRSLLPKADQMKKLSIPGIISRVLKYVPDLQQEVEGLVKKKEDLVMKISRKGGVATKESQRKIALRNSFFAVSTSRLNDCEAFIQISSIKAHKTPLSEVLLCLEKEGPLLLNASSFETFGRRGFYNLHFQVEKSYKLDSDILSEKLMSIYEKKETISPKYHDQAISSASSI 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02487 257 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 64 116 IPR011598 GO:0046983
Bva13g02487 257 SMART finulus 70 122 IPR011598 GO:0046983
Bva13g02487 257 MobiDBLite consensus disorder prediction 28 60 - -
Bva13g02487 257 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 65 134 IPR036638 GO:0046983
Bva13g02487 257 Gene3D - 60 146 IPR036638 GO:0046983
Bva13g02487 257 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 238 IPR015660 GO:0003700|GO:0006357
Bva13g02487 257 Pfam Helix-loop-helix DNA-binding domain 65 117 IPR011598 GO:0046983
Bva13g02487 257 PANTHER TRANSCRIPTION FACTOR ORG2-RELATED 1 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02487 Bva-Chr13 18687304 18688654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02487 1 240 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 41.502 1.31e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva13g02487 HLH 2.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02487 - - gmx:100803424 271.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02487 13 18687304 18688654 Bva13g02487 13 18687304 18688654 ECH