Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva13g02482 ATGGGAATAGCTACAGAGTCCCAGTTTCATGTATTGGCTGTCGATGACAGCTTAATAGATAGGACGCTAATTGAGAAGCTGCTCAAAATCTCTTCTTATCAAGTTACTACCGTTGATTCTGGTAGCAAGGCTTTGGAGTTTCTGGGCTTGCGTGAGAATGACCAGAGCGACCCAAATTCGCCATCTGTTTCCCCTAACAATCATCAGGAAGTGGAGGTGAACCTTATTATTACCGACTACTGTATGCCTGGCATGACAGGCTATgatttactcaaaaaaatcaagGAATCTTCATCTCTGAGAAACATCCCAGTAGTTATTATGTCATCGGAGAATGAGCCTTCAAGGATTAGCAGATGCTTGGAGGAAGGAGCAGaggaatttttcttgaaaCCAGTGAGGCTAGCAGATCTGAATAGGCTTAGACCCCATATGATGAAGACTAAGTTGAAGGATCAAATCCAAGAAGTAcaagaaaagattgaaaacCCAGAAGTTCAACAGCAGCTACATCAactgcaaaatgaaaatgaccaGCAACAAACGCCACAAGAACAACAACAGCTATCACTTCCACAAGCCAACAATCACAAGAGGAAGACCATGGAACAGGGGCCTGCACCTGAGGCTGACAGAACAAGACCAAGATATAATGACATAGCCACTGTAGTATG 674 0.3976 MGIATESQFHVLAVDDSLIDRTLIEKLLKISSYQVTTVDSGSKALEFLGLRENDQSDPNSPSVSPNNHQEVEVNLIITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENEPSRISRCLEEGAEEFFLKPVRLADLNRLRPHMMKTKLKDQIQEVQEKIENPEVQQQLHQLQNENDQQQTPQEQQQLSLPQANNHKRKTMEQGPAPEADRTRPRYNDIATVV 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva13g02482 224 MobiDBLite consensus disorder prediction 202 216 - -
Bva13g02482 224 SUPERFAMILY CheY-like 8 147 IPR011006 -
Bva13g02482 224 CDD REC_typeA_ARR 11 141 - -
Bva13g02482 224 Coils Coil 147 167 - -
Bva13g02482 224 MobiDBLite consensus disorder prediction 174 224 - -
Bva13g02482 224 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9-LIKE 4 219 - -
Bva13g02482 224 Gene3D - 10 217 - -
Bva13g02482 224 MobiDBLite consensus disorder prediction 174 200 - -
Bva13g02482 224 Pfam Response regulator receiver domain 11 138 IPR001789 GO:0000160
Bva13g02482 224 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Bva13g02482 224 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 219 IPR045279 GO:0009736
Bva13g02482 224 SMART REC_2 9 142 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva13g02482 Bva-Chr13 18657377 18659484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva13g02482 1 224 Response Regulator Gene Family AT3G57040 64.167 4.68e-99 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva13g02482 Response_reg 4.1e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva13g02482 K14492 - qsu:112033539 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02482 13 18657377 18659484 Bva13g02482 13 18657377 18659484 ECH